RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 EFCAB12Q6NXP0 572 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 TLDC1Q6P9B6 456 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 CPLX2Q6PUV4 134 aaKnown RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 FAM180AQ6UWF9 173 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 DSTYKQ6XUX3 929 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 LRRC55Q6ZSA7 311 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 LRRC8DQ7L1W4 858 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 MIER3Q7Z3K6 550 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 CREBRFQ8IUR6 639 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 DENND1CQ8IV53 801 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 SUGP1Q8IWZ8 645 aaKnown RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 CMIPQ8IY22 773 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 SYTL1Q8IYJ3 562 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 GRAMD1CQ8IYS0 662 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 DAW1Q8N136 415 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 SDR16C5Q8N3Y7 309 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 USP38Q8NB14 1042 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 CCDC148Q8NFR7 591 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 CCDC12Q8WUD4 166 aaPredicted RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 ATP6V1E2Q96A05 226 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 TMEM143Q96AN5 459 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 EPSTI1Q96J88 318 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 SGCZQ96LD1 299 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 FAM20AQ96MK3 541 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 KCNC2Q96PR1 638 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 TBCBQ99426 244 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 PLIN2Q99541 437 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 LBHD1Q9BQE6 289 aaPredicted RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 SDF4Q9BRK5 362 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 LXNQ9BS40 222 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 LSM14BQ9BX40 385 aaKnown RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 BTBD2Q9BX70 525 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 NAA15Q9BXJ9 866 aaKnown RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 LRRC27Q9C0I9 530 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 IKZF4Q9H2S9 585 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 C12orf65Q9H3J6 166 aaKnown RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 SEMA4AQ9H3S1 761 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 DHX33Q9H6R0 707 aaKnown RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 TTC12Q9H892 705 aaPredicted RBP2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 ANLNQ9NQW6 1124 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 ZNF302Q9NR11 478 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 TBC1D22BQ9NU19 505 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 MTMR10Q9NXD2 777 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 ERAP1Q9NZ08 941 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 TUBE1Q9UJT0 475 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 PADI3Q9ULW8 664 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 ST3GAL5Q9UNP4 418 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 SMC3Q9UQE7 1217 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 TMEM98Q9Y2Y6 226 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 SNX13Q9Y5W8 968 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 CDY2AQ9Y6F7 541 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 DUSP10Q9Y6W6 482 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 DMXL1Q9Y485 3027 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 TTC3P53804 2025 aa2.78□□□□□ -1.96
TNFRSF1A-210ENST00000537842 ZDBF2Q9HCK1 2354 aa2.78□□□□□ -1.97
TNFRSF1A-210ENST00000537842 WDFY3Q8IZQ1 3526 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LTBP2Q14767 1821 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MROH7Q68CQ1 1323 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ADGRA3Q8IWK6 1321 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 COL4A6Q14031 1691 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 A0A0G2JNJ9 132 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SMIM35A0A1B0GVV1 85 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RRN3P2A6NIE6 340 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RASA4BC9J798 803 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 E9PMD0 336 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GOLGA6L22H0YM25 854 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 H3BML4 177 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 B4GALT5O43286 388 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RASA4O43374 803 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PRICKLE3O43900 615 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NOBOXO60393 691 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 TMCC2O75069 709 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SKAP2O75563 359 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 KLHL18O94889 574 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PRPF6O94906 941 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LYPLA2O95372 231 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CNOT4O95628 575 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 AGR2O95994 175 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 FGBP02675 491 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 LPLP06858 475 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 POU2F2P09086 479 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GCFC2P16383 781 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 HOXA5P20719 270 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GLRA2P23416 452 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 DNAJB1P25685 340 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MARCKSP29966 332 aaPredicted RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 YWHABP31946 246 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 CSF2RBP32927 897 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 QARSP47897 775 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MCM2P49736 904 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 RARRES1P49788 294 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MRE11P49959 708 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 GPC3P51654 580 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MAPK10P53779 464 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 SLC12A3P55017 1021 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 ARL4CP56559 192 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 NLRP11P59045 1033 aaKnown RBP2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 PSMC5P62195 406 aa2.77□□□□□ -1.97
TNFRSF1A-210ENST00000537842 MRPS6P82932 125 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms