RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 GOLGA6L7A0A1B0GV03 622 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 ACSL4O60488 711 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 TBL1XO60907 577 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 DLDP09622 509 aaKnown RBP20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 POLR2EP19388 210 aaKnown RBP20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 GCNT1Q02742 428 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 KLHL10Q6JEL2 608 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 IL27RAQ6UWB1 636 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 RRAGAQ7L523 313 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CHCHD4Q8N4Q1 142 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 CLEC4CQ8WTT0 213 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 AZIN2Q96A70 460 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 GAREM1Q9H706 876 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PRSS16Q9NQE7 514 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 PTPRBP23467 1997 aa20.46■□□□□ 0.87
TNFRSF1B-204ENST00000536782 BICDL2A1A5D9 508 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CER1O95813 267 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CALCAP01258 141 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 C7P10643 843 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SLC6A4P31645 630 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CD70P32970 193 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ZBTB16Q05516 673 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FAM133BQ5BKY9 247 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TTI2Q6NXR4 508 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FOXR2Q6PJQ5 311 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 RAB44Q7Z6P3 723 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 MFN1Q8IWA4 741 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 EHBP1Q8NDI1 1231 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 C1orf216Q8TAB5 229 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 WFDC5Q8TCV5 224 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 NELFBQ8WX92 580 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ZCCHC14Q8WYQ9 949 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SNX19Q92543 992 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 DDX50Q9BQ39 737 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 MIS12Q9H081 205 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 C6orf106Q9H6K1 298 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SUN2Q9UH99 717 aa20.45■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FAM221BA6H8Z2 402 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 DNTTP04053 509 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ZNF883P0CG24 379 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ACSL1P33121 698 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 MATKP42679 507 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ARHGEF19Q8IW93 802 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 HJURPQ8NCD3 748 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 BTBD1Q9H0C5 482 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 IL21RQ9HBE5 538 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 STIM2Q9P246 746 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 LAMA5O15230 3695 aa20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FASNP49327 2511 aaKnown RBP20.44■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ACACAQ13085 2346 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TYW5A2RUC4 315 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 PPP1R3GB7ZBB8 358 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SART1O43290 800 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FTH1P19P0C7X4 201 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 AFF3P51826 1226 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 RPS14P62263 151 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 BNC1Q01954 994 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 HLA-BQ31612 363 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TTC31Q49AM3 519 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FIBINQ8TAL6 211 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SETD7Q8WTS6 366 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FCRL2Q96LA5 508 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SERPINB11Q96P15 392 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ST7Q9NRC1 585 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TM7SF3Q9NS93 570 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CTNND2Q9UQB3 1225 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TLR6Q9Y2C9 796 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 MUC22E2RYF6 1773 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TMEM131Q92545 1883 aa20.43■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CBFA2T3O75081 653 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SEMA4FO95754 770 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 GNA14O95837 355 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FYNP06241 537 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CSNK1EP49674 416 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ST8SIA6P61647 398 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 KCNH2Q12809 1159 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 NNTQ13423 1086 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 NADSYN1Q6IA69 706 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CCDC117Q8IWD4 279 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TRIM59Q8IWR1 403 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SCUBE3Q8IX30 993 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 DQX1Q8TE96 717 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ADAMTS14Q8WXS8 1223 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TTC17Q96AE7 1141 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FAM149B1Q96BN6 582 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 PRICKLE1Q96MT3 831 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 PCOLCE2Q9UKZ9 415 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 APOBEC2Q9Y235 224 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 FNDC3AQ9Y2H6 1198 aaKnown RBP20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 APC2O95996 2303 aa20.42■□□□□ 0.86
TNFRSF1B-204ENST00000536782 GOLGA4Q13439 2230 aaKnown RBP20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 A0A1B0GVT2 93 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SRRM3A6NNA2 597 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 AFPP02771 609 aaKnown RBP20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ASLP04424 464 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 BMP6P22004 513 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 GPD2P43304 727 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ACADSBP45954 432 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 RPL34P49207 117 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms