RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 SMARCD2Q92925 531 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 RSPRY1Q96DX4 576 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 MYEOVQ96EZ4 313 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 NECTIN4Q96NY8 510 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 RNF157Q96PX1 679 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 OSBPL8Q9BZF1 889 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 LINC00597Q9H2U6 94 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 CDC23Q9UJX2 597 aa11.9□□□□□ -0.5
CDCA3-206ENST00000536241 hCG_1818297A0A087WSY0 165 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TCRBV7S2A1N4TA0A589 114 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 E2F8A0AVK6 867 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 H3BRJ5 948 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 CES2O00748 559 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 MBTPS2O43462 519 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TSPAN3O60637 253 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 FGGP02679 453 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 SP100P23497 879 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 EPHB2P29323 1055 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 HCAR3P49019 387 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TPI1P60174 286 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ZNF77Q15935 545 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TAZQ16635 292 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 LONRF2Q1L5Z9 754 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 RWDD4Q6NW29 188 aaKnown RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 LRRC31Q6UY01 552 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 RFX8Q6ZV50 586 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 CHSY1Q86X52 802 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 SLC13A5Q86YT5 568 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 RFX6Q8HWS3 928 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 LGI2Q8N0V4 545 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ACTRT1Q8TDG2 376 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 IGSF8Q969P0 613 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 EPAS1Q99814 870 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ZNF670Q9BS34 389 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ZFP14Q9HCL3 533 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 MPP6Q9NZW5 540 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 STIM2Q9P246 746 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 STOML2Q9UJZ1 356 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ZNF510Q9Y2H8 683 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 DRGXA6NNA5 263 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 HEPACAM2A8MVW5 462 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 F5H5T6 163 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 PDE2AO00408 941 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 CST8O60676 142 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 LATS1O95835 1130 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TCF3P15923 654 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ERCC2P18074 760 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 IRAK1P51617 712 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 DYNLT1P63172 113 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 NRG1Q02297 640 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 SMAD4Q13485 552 aaKnown RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 PPP2R5EQ16537 467 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ACBD5Q5T8D3 534 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 MANEALQ5VSG8 457 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ZDHHC14Q8IZN3 488 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ADGRG2Q8IZP9 1017 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 CFAP52Q8N1V2 620 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 FAF2Q96CS3 445 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TBC1D31Q96DN5 1066 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TMA16Q96EY4 203 aaKnown RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 DDX50Q9BQ39 737 aaKnown RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 PLA2G2FQ9BZM2 168 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 KIF9Q9HAQ2 790 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TRPV4Q9HBA0 871 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 ETNK2Q9NVF9 386 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 RCOR3Q9P2K3 495 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 TTC7AQ9ULT0 858 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-206ENST00000536241 MFHAS1Q9Y4C4 1052 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 MRFAP1Q9Y605 127 aa11.89□□□□□ -0.51
CDCA3-206ENST00000536241 SZT2Q5T011 3432 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 DOCK8Q8NF50 2099 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 IGLV3-10A0A075B6K4 115 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 CNTN5O94779 1100 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 TJP3O95049 919 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 FCARP24071 287 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 PTPN7P35236 360 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 CHKAP35790 457 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 PAFAH1B1P43034 410 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 ZNF135P52742 658 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-206ENST00000536241 VCPP55072 806 aaKnown RBP11.88□□□□□ -0.51
CDCA3-206ENST00000536241 RPS24P62847 133 aaKnown RBP11.88□□□□□ -0.51
CDCA3-206ENST00000536241 USP4Q13107 963 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 TUBB2AQ13885 445 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 DPYSQ14117 519 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 ALFQ53S48 1182 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 CCDC181Q5TID7 509 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 PARM1Q6UWI2 310 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 TPGS1Q6ZTW0 290 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 OTOP3Q7RTS5 596 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 VSIG1Q86XK7 387 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 BPIFB1Q8TDL5 484 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-206ENST00000536241 RPP25Q9BUL9 199 aaKnown RBP11.88□□□□□ -0.51
CDCA3-206ENST00000536241 TUBB2BQ9BVA1 445 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 PRDM6Q9NQX0 595 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 ARHGEF4Q9NR80 690 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 TBC1D14Q9P2M4 693 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms