RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 EME1Q96AY2 570 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 HSPBAP1Q96EW2 488 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 HES6Q96HZ4 224 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 MAP3K14Q99558 947 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 RANBP17Q9H2T7 1088 aaKnown RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 PANK3Q9H999 370 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 GOLGA6AQ9NYA3 693 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 POLR1AO95602 1720 aaPredicted RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 A0A1W2PPL8 197 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 DENND3A2RUS2 1198 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 KITP10721 976 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 KLRC1P26715 233 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 USP8P40818 1118 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 SOX2P48431 317 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 PCYT1AP49585 367 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 VPS41P49754 854 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 GPS2Q13227 327 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 PPP2R5AQ15172 486 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 PDCD2Q16342 344 aaPredicted RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 DNAJC21Q5F1R6 531 aaKnown RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 ASPHD1Q5U4P2 390 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 CCDC30Q5VVM6 783 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 GRHL2Q6ISB3 625 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 ZNF280DQ6N043 979 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 FAM83HQ6ZRV2 1179 aaPredicted RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 GRAMD1CQ8IYS0 662 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 ARL14EPQ8N8R7 260 aaPredicted RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 KIF18AQ8NI77 898 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 EXOC6Q8TAG9 804 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 PIBF1Q8WXW3 757 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 MAML1Q92585 1016 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 CENPIQ92674 756 aaPredicted RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 TAF15Q92804 592 aaKnown RBP eCLIP2.81□□□□□ -1.96
SKA3-207ENST00000536239 KAT2BQ92831 832 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 CELF1Q92879 486 aaKnown RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 C1GALT1C1Q96EU7 318 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 INPP4AQ96PE3 977 aaPredicted RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 SH3GL3Q99963 347 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 SENP7Q9BQF6 1050 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 TTLL2Q9BWV7 592 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 DCLK3Q9C098 648 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 AAMDCQ9H7C9 122 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 SAP30LQ9HAJ7 183 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 SIRT3Q9NTG7 399 aaPredicted RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 CHCHD3Q9NX63 227 aaKnown RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 G3BP2Q9UN86 482 aaKnown RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 SLC27A6Q9Y2P4 619 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 RIPOR2Q9Y4F9 1068 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 V9GYY5 206 aaPredicted RBP2.81□□□□□ -1.96
SKA3-207ENST00000536239 ARHGAP31Q2M1Z3 1444 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 NCOA2Q15596 1464 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 WDR81Q562E7 1941 aa2.81□□□□□ -1.96
SKA3-207ENST00000536239 CTTNBP2Q8WZ74 1663 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ABCA5Q8WWZ7 1642 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 MAPKBP1O60336 1514 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ERICH3Q5RHP9 1530 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 UHRF1BP1LA0JNW5 1464 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 FHAD1B1AJZ9 1412 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 CNTLNQ9NXG0 1405 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 DHX29Q7Z478 1369 aaKnown RBP2.8□□□□□ -1.96
SKA3-207ENST00000536239 IL16Q14005 1332 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 SYNRGQ9UMZ2 1314 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 A0A1B0GVY2 172 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ERICH4A6NGS2 130 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 OR6C75A6NL08 312 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ERI2A8K979 691 aaKnown RBP2.8□□□□□ -1.96
SKA3-207ENST00000536239 HMGB1P1B2RPK0 211 aaPredicted RBP2.8□□□□□ -1.96
SKA3-207ENST00000536239 FAM227AF5H4B4 570 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 KINO60870 393 aaKnown RBP2.8□□□□□ -1.96
SKA3-207ENST00000536239 TPM1P09493 284 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 CT47B1P0C2W7 299 aaPredicted RBP2.8□□□□□ -1.96
SKA3-207ENST00000536239 TMEM225BP0DP42 221 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 CPA1P15085 419 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 NTSR1P30989 418 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 HOXD12P35452 270 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 PEX19P40855 299 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 PDLIM4P50479 330 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 RWDD2BP57060 319 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 KRTAP10-3P60369 221 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 RAE1P78406 368 aaKnown RBP2.8□□□□□ -1.96
SKA3-207ENST00000536239 NUCB2P80303 420 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ICA1Q05084 483 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 GAD2Q05329 585 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 Q0VFX4 171 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 COASYQ13057 564 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 STK3Q13188 491 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ARHGEF7Q14155 803 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 CLCA4Q14CN2 919 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 KLHL40Q2TBA0 621 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ZNF718Q3SXZ3 478 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ATAT1Q5SQI0 421 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 AP1ARQ63HQ0 302 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 CLEC9AQ6UXN8 241 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 MMS22LQ6ZRQ5 1243 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 CLEC17AQ6ZS10 378 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 C16orf82Q7Z2V1 217 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 ARMC9Q7Z3E5 817 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 EFCAB13Q8IY85 973 aa2.8□□□□□ -1.96
SKA3-207ENST00000536239 NME8Q8N427 588 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms