RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MED15Q96RN5 788 aa13.63□□□□□ -0.23
RTN3-207ENST00000536011 ZSWIM1Q9BR11 485 aa13.63□□□□□ -0.23
RTN3-207ENST00000536011 TMEM245Q9H330 911 aa13.63□□□□□ -0.23
RTN3-207ENST00000536011 UBE2TQ9NPD8 197 aaPredicted RBP13.63□□□□□ -0.23
RTN3-207ENST00000536011 CD93Q9NPY3 652 aa13.63□□□□□ -0.23
RTN3-207ENST00000536011 SUN2Q9UH99 717 aa13.63□□□□□ -0.23
RTN3-207ENST00000536011 RWDD2AQ9UIY3 292 aa13.63□□□□□ -0.23
RTN3-207ENST00000536011 PCDH15Q96QU1 1955 aa13.63□□□□□ -0.23
RTN3-207ENST00000536011 CACNA1EQ15878 2313 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 METTL12A8MUP2 240 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 THAP12O43422 761 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 LETM1O95202 739 aaPredicted RBP13.62□□□□□ -0.23
RTN3-207ENST00000536011 DNTTP04053 509 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 GNA15P30679 374 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 GPD2P43304 727 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 RPL34P49207 117 aaKnown RBP13.62□□□□□ -0.23
RTN3-207ENST00000536011 UBE2HP62256 183 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 SIM1P81133 766 aaPredicted RBP13.62□□□□□ -0.23
RTN3-207ENST00000536011 DCAF12L1Q5VU92 463 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 RFWD3Q6PCD5 774 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 IL27RAQ6UWB1 636 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 GBP6Q6ZN66 633 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 CACUL1Q86Y37 369 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 SCUBE3Q8IX30 993 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 ZCCHC9Q8N567 271 aaKnown RBP13.62□□□□□ -0.23
RTN3-207ENST00000536011 CYB5D2Q8WUJ1 264 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 NOX5Q96PH1 765 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 ADAM33Q9BZ11 813 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 MIR1-1HGQ9H1L0 117 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 POPDC2Q9HBU9 364 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 FSCN3Q9NQT6 498 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 KIAA1468Q9P260 1216 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 TJP2Q9UDY2 1190 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 SLC12A6Q9UHW9 1150 aa13.62□□□□□ -0.23
RTN3-207ENST00000536011 GTPBP10A4D1E9 387 aaKnown RBP13.61□□□□□ -0.23
RTN3-207ENST00000536011 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 KCNJ18B7U540 433 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 BCAT2O15382 392 aaPredicted RBP13.61□□□□□ -0.23
RTN3-207ENST00000536011 RNASEH1O60930 286 aaKnown RBP13.61□□□□□ -0.23
RTN3-207ENST00000536011 GADD45BO75293 160 aaPredicted RBP13.61□□□□□ -0.23
RTN3-207ENST00000536011 MOCS3O95396 460 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 CER1O95813 267 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 PROS1P07225 676 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 C7P10643 843 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 HLA-EP13747 358 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 SLC6A4P31645 630 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 SNX16P57768 344 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 GRIK2Q13002 908 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 MTA1Q13330 715 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 ZNF776Q68DI1 518 aaPredicted RBP13.61□□□□□ -0.23
RTN3-207ENST00000536011 TRIM65Q6PJ69 517 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 UNQ6494/PRO21346Q6UXR6 183 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 KDM1BQ8NB78 822 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 FIBINQ8TAL6 211 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 FCRL2Q96LA5 508 aaPredicted RBP13.61□□□□□ -0.23
RTN3-207ENST00000536011 SLC4A5Q9BY07 1137 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 THAP9Q9H5L6 903 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 STIM2Q9P246 746 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 APEX2Q9UBZ4 518 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 SCML1Q9UN30 329 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
RTN3-207ENST00000536011 MUC22E2RYF6 1773 aaPredicted RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 MOCS2O96007 188 aaPredicted RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 CALCAP01258 141 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 SLC2A3P11169 496 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 MAOBP27338 520 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 CD70P32970 193 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 USP8P40818 1118 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 SGSHP51688 502 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 AFF3P51826 1226 aaKnown RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 YWHAZP63104 245 aaKnown RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 PDCLQ13371 301 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 TEAD4Q15561 434 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 PTPRNQ16849 979 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 ZNF423Q2M1K9 1284 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 MS4A13Q5J8X5 152 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 TTC39BQ5VTQ0 682 aaPredicted RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 RNF219Q5W0B1 726 aaPredicted RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 DENND1BQ6P3S1 775 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 TMEM110Q86TL2 294 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 TAC4Q86UU9 113 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 FAM124AQ86V42 546 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 CARNMT1Q8N4J0 409 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 MLKLQ8NB16 471 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 SNX19Q92543 992 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 TTC17Q96AE7 1141 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 SLC39A13Q96H72 371 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 BTN2A3PQ96KV6 586 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 PRICKLE1Q96MT3 831 aaPredicted RBP13.6□□□□□ -0.23
RTN3-207ENST00000536011 BTBD1Q9H0C5 482 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 NAALADL1Q9UQQ1 740 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
RTN3-207ENST00000536011 NEUROG3Q9Y4Z2 214 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms