RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CPA2P48052 419 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 TAF6P49848 677 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 PDE1BQ01064 536 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 KDSRQ06136 332 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 THOC5Q13769 683 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 XKR4Q5GH76 650 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 ZNF618Q5T7W0 954 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 CAPRIN2Q6IMN6 1127 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 BNIPLQ7Z465 357 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 NET1Q7Z628 596 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 SCUBE1Q8IWY4 988 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 OSMRQ99650 979 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 IGSF9Q9P2J2 1179 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 PLA2G4CQ9UP65 541 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 NRCAMQ92823 1304 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 HUS1O60921 280 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 FGF3P11487 239 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 GJA5P36382 358 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 SLC1A6P48664 564 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 ALDH18A1P54886 795 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 SESN3P58005 492 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 IRX4P78413 519 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 MRPS35P82673 323 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 R3HDM1Q15032 1099 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 PAFAH1B3Q15102 231 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 ZRSR2Q15696 482 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 TEDDM1Q5T9Z0 273 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 IQSEC1Q6DN90 963 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 C16orf46Q6P387 395 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 CCNYQ8ND76 341 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 OR6J1Q8NGC5 347 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 ZC3H15Q8WU90 426 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 SPDL1Q96EA4 605 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 FAM161BQ96MY7 647 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 NPY6RQ99463 290 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 ABHD16BQ9H3Z7 469 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 FAM96AQ9H5X1 160 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 SBF1O95248 1867 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 SMIM35A0A1B0GVV1 85 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 DAB1O75553 588 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 KLHL2O95198 593 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 ADIGQ0VDE8 80 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 RCN2Q14257 317 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 TRMT5Q32P41 509 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 SV2CQ496J9 727 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 LDLRAD1Q5T700 205 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 C6orf163Q5TEZ5 329 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 LRRC74BQ6ZQY2 392 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 DPP9Q86TI2 863 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 B3GALNT2Q8NCR0 500 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 FBXO27Q8NI29 283 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 NRG4Q8WWG1 115 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 SCG3Q8WXD2 468 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 KCTD13Q8WZ19 329 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 EBF4Q9BQW3 602 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 APOL6Q9BWW8 343 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 PRDM12Q9H4Q4 367 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 RNF19AQ9NV58 838 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 ZFATQ9P243 1243 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 TXNDC16Q9P2K2 825 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 STAP1Q9ULZ2 295 aa16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 APOBEC2Q9Y235 224 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-202ENST00000535997 PRR5-ARHGAP8B1AHC4 643 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 SERPINE1P05121 402 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 SKIP12755 728 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 ARHGAP8P85298 464 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 KLC1Q07866 573 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 IFRD2Q12894 506 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 ZNF567Q8N184 647 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 NME8Q8N427 588 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 PPFIBP2Q8ND30 876 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 PGBD4Q96DM1 585 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 SLC10A4Q96EP9 437 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 SLC9A7Q96T83 725 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 OSBPL1AQ9BXW6 950 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 LRCH1Q9Y2L9 728 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 PSAT1Q9Y617 370 aa16.46■□□□□ 0.23
CHMP1A-202ENST00000535997 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 F5H423 210 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 ITM2AO43736 263 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 CIB2O75838 187 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 KCNA4P22459 653 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 WARSP23381 471 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 PAX7P23759 505 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 PSMB4P28070 264 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 GP5P40197 560 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 LILRA4P59901 499 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 RPL10AP62906 217 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 SPANXN3Q5MJ09 141 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 GRTP1Q5TC63 336 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 PDZD4Q76G19 769 aaPredicted RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 PID1Q7Z2X4 250 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 TOP6BLQ8N6T0 577 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 PPP4R1Q8TF05 950 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 NDRG1Q92597 394 aaKnown RBP16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 CPNE1Q99829 537 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 KLK14Q9P0G3 267 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 DNAJC16Q9Y2G8 782 aa16.45■□□□□ 0.22
CHMP1A-202ENST00000535997 MBLAC1A4D2B0 266 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms