RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 LRRC72A6NJI9 287 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 IRAK2O43187 625 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PCDHGA12O60330 932 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 MOCS3O95396 460 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ASLP04424 464 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 VDRP11473 427 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ABCB4P21439 1286 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TBXAS1P24557 533 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 NDUFA8P51970 172 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CYP4F3Q08477 520 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DPYDQ12882 1025 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CDH18Q13634 790 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RNF219Q5W0B1 726 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 KIAA0895LQ68EN5 471 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DBX2Q6ZNG2 339 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 KRBA2Q6ZNG9 492 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ADIPOR2Q86V24 386 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 HJURPQ8NCD3 748 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 UBA3Q8TBC4 463 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 EEF2KMTQ96G04 330 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 OMDQ99983 421 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 IRX2Q9BZI1 471 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PRSS16Q9NQE7 514 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 AASDHPPTQ9NRN7 309 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 FBXL12Q9NXK8 326 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 STIM2Q9P246 746 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 STOML2Q9UJZ1 356 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 MUC22E2RYF6 1773 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TMEM131Q92545 1883 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 FASNP49327 2511 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 FAM149AA5PLN7 773 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TRABD2BA6NFA1 517 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 YJEFN3A6XGL0 299 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 E7ENQ6 273 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 E9PAM4 449 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 H0Y8X5 98 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TULP2O00295 520 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 KCNK3O14649 394 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SLC16A3O15427 465 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RNASEH2AO75792 299 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ITGAVP06756 1048 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CD70P32970 193 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CTSKP43235 329 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ABCG1P45844 678 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TBX4P57082 545 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DAOAP59103 153 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PKP1Q13835 747 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PTPRNQ16849 979 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SLC45A4Q5BKX6 768 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 MPP7Q5T2T1 576 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RFWD3Q6PCD5 774 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DHRS13Q6UX07 377 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 USP30Q70CQ3 517 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CARNMT1Q8N4J0 409 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 KCTD13Q8WZ19 329 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 NXPE2Q96DL1 559 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PABPC3Q9H361 631 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 KIAA1257Q9ULG3 409 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SLCO1B1Q9Y6L6 691 aa13.48□□□□□ -0.25
TNFRSF1A-207ENST00000535958 M0QYV0 167 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 YKT6O15498 198 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ACSL4O60488 711 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DKK1O94907 266 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RGS7P49802 495 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 NUCB2P80303 420 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 LRMPQ12912 555 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 NUMA1Q14980 2115 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SMAD1Q15797 465 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ZCWPW2Q504Y3 356 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SOWAHCQ53LP3 525 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 BHLHA9Q7RTU4 235 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TMPRSS12Q86WS5 348 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DHX40Q8IX18 779 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SCUBE3Q8IX30 993 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SMYD4Q8IYR2 804 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 IRGQQ8WZA9 623 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SLC6A18Q96N87 628 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SERPINB11Q96P15 392 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RSPH9Q9H1X1 276 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 GDF3Q9NR23 364 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ATP6V1DQ9Y5K8 247 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 APC2O95996 2303 aa13.47□□□□□ -0.25
TNFRSF1A-207ENST00000535958 KNL1Q8NG31 2342 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ITPR1Q14643 2758 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 A0A1B0GTQ1 180 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 A0A1W2PP55 124 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 A0A1W2PPC4 97 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 O00370 1275 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PIK3R2O00459 728 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ENC1O14682 589 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 VILLO15195 856 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SIN3BO75182 1162 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 LTFP02788 710 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CDK4P11802 303 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 JUPP14923 745 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms