RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 NADSYN1Q6IA69 706 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 GJB7Q6PEY0 223 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 TMEM110Q86TL2 294 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 TAC4Q86UU9 113 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 MINDY1Q8N5J2 469 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 FBRSQ9HAH7 460 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 POPDC2Q9HBU9 364 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 APEX2Q9UBZ4 518 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 NFE2L3Q9Y4A8 694 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 CKAP5Q14008 2032 aa16.8■□□□□ 0.28
CLSTN3-204ENST00000535313 GTPBP10A4D1E9 387 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 PAPSS1O43252 624 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 MOCS2O96007 188 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 IGLV3-19P01714 112 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 YWHAZP63104 245 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 CDH18Q13634 790 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 PTPRNQ16849 979 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 SYPL2Q5VXT5 272 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 CARNMT1Q8N4J0 409 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 ZNF366Q8N895 744 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 FIBINQ8TAL6 211 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 WFDC5Q8TCV5 224 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 DNASE2BQ8WZ79 361 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 SLC39A13Q96H72 371 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 NUCKS1Q9H1E3 243 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 MIR1-1HGQ9H1L0 117 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 LHX5Q9H2C1 402 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 THAP9Q9H5L6 903 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 ACP6Q9NPH0 428 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 SUN2Q9UH99 717 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 CYTH4Q9UIA0 394 aa16.79■□□□□ 0.28
CLSTN3-204ENST00000535313 A0A1B0GTW7 788 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 ST8SIA6P61647 398 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 RPS24P62847 133 aaKnown RBP16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 FOXC1Q12948 553 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 SEMA3BQ13214 749 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 PDCLQ13371 301 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 ST3GAL2Q16842 350 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 MS4A13Q5J8X5 152 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 DCAF12L1Q5VU92 463 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 FAM124AQ86V42 546 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 IRF2BP1Q8IU81 584 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 FAM114A1Q8IWE2 563 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 PRICKLE1Q96MT3 831 aaPredicted RBP16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 ZDHHC5Q9C0B5 715 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 TJP2Q9UDY2 1190 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 SLC12A6Q9UHW9 1150 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 CACNA1EQ15878 2313 aa16.78■□□□□ 0.28
CLSTN3-204ENST00000535313 METTL12A8MUP2 240 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 BECN2A8MW95 431 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 TRUB2O95900 331 aaKnown RBP16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 ASLP04424 464 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 PON1P27169 355 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 APBA1Q02410 837 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 PTK2Q05397 1052 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 ZBTB16Q05516 673 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 TTC31Q49AM3 519 aaPredicted RBP16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 DCAF6Q58WW2 860 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 ZC3H12AQ5D1E8 599 aaKnown RBP16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 SMYD5Q6GMV2 418 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 PIP4P1Q86T03 277 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 CHSY1Q86X52 802 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 CFAP52Q8N1V2 620 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 ZCCHC9Q8N567 271 aaKnown RBP16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 OR2I1PQ8NGU4 316 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 SHC3Q92529 594 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 TTC17Q96AE7 1141 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 BTN2A3PQ96KV6 586 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 NOX5Q96PH1 765 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 PCED1AQ9H1Q7 454 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 CLSTN2Q9H4D0 955 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 FAM204AQ9H8W3 233 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 PRSS16Q9NQE7 514 aa16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 DNAAF2Q9NVR5 837 aaKnown RBP16.77■□□□□ 0.28
CLSTN3-204ENST00000535313 ADAMTS9Q9P2N4 1935 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 H0Y626 953 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 BCAT2O15382 392 aaPredicted RBP16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 LUC7L3O95232 432 aaKnown RBP16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 MOCS3O95396 460 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 DNTTP04053 509 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 GLI1P08151 1106 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 CSKP41240 450 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 SNX16P57768 344 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 CDK17Q00537 523 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 GRIK2Q13002 908 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 MAN2A1Q16706 1144 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 EFHC1Q5JVL4 640 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 RAP1GAP2Q684P5 730 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 PASD1Q8IV76 773 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 LGI2Q8N0V4 545 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 ATP6V0D2Q8N8Y2 350 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 SNX19Q92543 992 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 MYEOVQ96EZ4 313 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 PPP1R13BQ96KQ4 1090 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 LMLNQ96KR4 655 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 KIAA1522Q9P206 1035 aaPredicted RBP16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
CLSTN3-204ENST00000535313 XPO7Q9UIA9 1087 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms