RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 MCOLN3Q8TDD5 553 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 UTP15Q8TED0 518 aaKnown RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 CCDC12Q8WUD4 166 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 TGFBRAP1Q8WUH2 860 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 SCFD1Q8WVM8 642 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 SMG7Q92540 1137 aaKnown RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 INPP5DQ92835 1189 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 SLC22A18Q96BI1 424 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 HSPBAP1Q96EW2 488 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 PBKQ96KB5 322 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 PHACTR3Q96KR7 559 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 NECAB3Q96P71 396 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 RMDN3Q96TC7 470 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 LLPHQ9BRT6 129 aaKnown RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 CCM2Q9BSQ5 444 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 NTMT1Q9BV86 223 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 BRIP1Q9BX63 1249 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 OR2B2Q9GZK3 357 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 SCAND2PQ9GZW5 306 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 MKRN2Q9H000 416 aaKnown RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 EPS8L2Q9H6S3 715 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 ZNF287Q9HBT7 754 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 RAVER2Q9HCJ3 691 aaKnown RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 S100A14Q9HCY8 104 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 TM9SF3Q9HD45 589 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 ANKEF1Q9NU02 776 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 ZDHHC7Q9NXF8 308 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 CACNA2D2Q9NY47 1150 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 OR6C2Q9NZP2 312 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 SUCOQ9UBS9 1254 aaKnown RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 FBXO40Q9UH90 709 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 SLC12A6Q9UHW9 1150 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 ENOPH1Q9UHY7 261 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 TINAGQ9UJW2 476 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 RPS6KA6Q9UK32 745 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 CPSF3Q9UKF6 684 aaKnown RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 PADI4Q9UM07 663 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 DIMT1Q9UNQ2 313 aaKnown RBP5.35□□□□□ -1.55
SNHG1-201ENST00000535076 SPG7Q9UQ90 795 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 ERVK-19Q9WJR5 959 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 GINS2Q9Y248 185 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 USP16Q9Y5T5 823 aa5.35□□□□□ -1.55
SNHG1-201ENST00000535076 HECW1Q76N89 1606 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 EFCAB6Q5THR3 1501 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 MAGI1Q96QZ7 1491 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 OVOS2A0A0G2JMS6 1433 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 OVOS2A0A0J9YW53 1432 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 RGS12O14924 1447 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 DAPK1P53355 1430 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 OVOS2Q6IE36 1432 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 WDR17Q8IZU2 1322 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SYNGAP1Q96PV0 1343 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 E2F8A0AVK6 867 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CAPN8A6NHC0 703 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ZNF98A6NK75 572 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TCP11X1B4DZS4 312 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 B4E1Z4 1266 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 HSBP1L1C9JCN9 74 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 F8W031 263 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 RBAK-RBAKDNI3L0D1 243 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 J3KRW8 73 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 KPNA4O00629 521 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TRAFD1O14545 582 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TOR1AO14656 332 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 RASGRF2O14827 1237 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 MAGEB3O15480 346 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 MTSS1O43312 755 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SMAD6O43541 496 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 EIF4EBP3O60516 100 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CCDC22O60826 627 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 NOS1APO75052 506 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 PTP4A3O75365 173 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CIAO1O76071 339 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 IL33O95760 270 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 WDPCPO95876 746 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CFBP00751 764 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 APOC1P02654 83 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 RB1P06400 928 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CELA3AP09093 270 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 MYBL1P10243 752 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ICAM2P13598 275 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ANXA8P13928 327 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 MYL6BP14649 208 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 NPR1P16066 1061 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CAPN3P20807 821 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 BMP6P22004 513 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CHMP24386 653 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ARNTP27540 789 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SPAM1P38567 509 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 IGHMBP2P38935 993 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 PCP4P48539 62 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 HOXA1P49639 335 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 PSMD4P55036 377 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 GP2P55259 537 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 NPEPPSP55786 919 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 DCDC1P59894 354 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 RPL10AP62906 217 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CDR2Q01850 454 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 CDK5R2Q13319 367 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 NAB1Q13506 487 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms