RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SPACA3Q8IXA5 215 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 OR8K1Q8NGG5 319 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TAS1R2Q8TE23 839 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 GANQ9H2C0 597 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 OSGEPQ9NPF4 335 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 RAB20Q9NX57 234 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 WDR35Q9P2L0 1181 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 CDH9Q9ULB4 789 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 ANKRD6Q9Y2G4 727 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 SNX9Q9Y5X1 595 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 MYOFQ9NZM1 2061 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 PRRT4C9JH25 899 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 NPC1O15118 1278 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 TRIM24O15164 1050 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 PAPSS1O43252 624 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 SLC28A2O43868 658 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 CACNG3O60359 315 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 PHACTR2O75167 634 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 RFPL3O75679 317 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 VNN1O95497 513 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 IGLV3-19P01714 112 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 HLA-DRAP01903 254 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 ITGB3P05106 788 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 GRIA4P48058 902 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 TMPRSS3P57727 454 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 TFAMQ00059 246 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 CYP27A1Q02318 531 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 BIRC3Q13489 604 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 FUT11Q495W5 492 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 GJB7Q6PEY0 223 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 RRAGAQ7L523 313 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 TRAPPC11Q7Z392 1133 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 OSTM1Q86WC4 334 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 BBS7Q8IWZ6 715 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 FBXL13Q8NEE6 735 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 PDZD8Q8NEN9 1154 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 PRCCQ92733 491 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 MYLPFQ96A32 169 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 C8orf48Q96LL4 319 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 PANX2Q96RD6 677 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 SYT15Q9BQS2 421 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 KCNF1Q9H3M0 494 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 NLRC4Q9NPP4 1024 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 STON1Q9Y6Q2 735 aa11.85□□□□□ -0.51
TRAPPC4-213ENST00000533149 NEDD8-MDP1E9PL57 170 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 PYCARD-AS1I3L0S3 204 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 ENC1O14682 589 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 COCHO43405 550 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 BRINP1O60477 761 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 ATP2C2O75185 946 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 CST3P01034 146 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 TNNC2P02585 160 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 TMEM191BP0C7N4 346 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 ACADMP11310 421 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 UCHL3P15374 230 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 ORC1Q13415 861 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 SOWAHAQ2M3V2 549 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 TSR1Q2NL82 804 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 TBC1D25Q3MII6 688 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 HECTD3Q5T447 861 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 HES3Q5TGS1 186 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 SCARA3Q6AZY7 606 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 TMPRSS6Q8IU80 811 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 SNX19Q92543 992 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 TATDN2Q93075 761 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 SIPA1Q96FS4 1042 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 ANKRD36BP1Q96IX9 119 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 ZFRQ96KR1 1074 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 LGMNQ99538 433 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 BBS2Q9BXC9 721 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 MKRN2Q9H000 416 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 UBE2TQ9NPD8 197 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 DNAJC12Q9UKB3 198 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 FHOD1Q9Y613 1164 aa11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAPPC4-213ENST00000533149 KNTC1P50748 2209 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 COL6A6A6NMZ7 2263 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 HECTD1Q9ULT8 2610 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 CFAP46Q8IYW2 2715 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 WASH3PC4AMC7 463 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 F8VP50 259 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 H0Y8X5 98 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 HCRTO43612 131 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 SYNCRIPO60506 623 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 LDOC1O95751 146 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 SKILP12757 684 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 TYRP14679 529 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 YWHAQP27348 245 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 PIK3CAP42336 1068 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 DGKGP49619 791 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 PSMC1P62191 440 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 RBP5P82980 135 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 CCZ1BP86790 482 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms