RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 HES3Q5TGS1 186 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 RESP18Q5W5W9 173 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 PM20D1Q6GTS8 502 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 MMAAQ8IVH4 418 aaKnown RBP13.57□□□□□ -0.24
COPB1-209ENST00000533096 WFDC5Q8TCV5 224 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 GOLGA1Q92805 767 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 NXPE2Q96DL1 559 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
COPB1-209ENST00000533096 FCRL3Q96P31 734 aaPredicted RBP13.57□□□□□ -0.24
COPB1-209ENST00000533096 ORAI3Q9BRQ5 295 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 PABPC3Q9H361 631 aaKnown RBP13.57□□□□□ -0.24
COPB1-209ENST00000533096 SERGEFQ9UGK8 458 aa13.57□□□□□ -0.24
COPB1-209ENST00000533096 HBS1LQ9Y450 684 aaKnown RBP13.57□□□□□ -0.24
COPB1-209ENST00000533096 MYO18AQ92614 2054 aaKnown RBP13.56□□□□□ -0.24
COPB1-209ENST00000533096 YJEFN3A6XGL0 299 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 E7ENQ6 273 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 MID1O15344 667 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 RFPL3O75679 317 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 CD38P28907 300 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 SLC8A1P32418 973 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 PSMC2P35998 433 aaKnown RBP13.56□□□□□ -0.24
COPB1-209ENST00000533096 ADIGQ0VDE8 80 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 SHBQ15464 509 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 RAB41Q5JT25 222 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
COPB1-209ENST00000533096 FAM217AQ8IXS0 508 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 SIX6OS1Q8N1H7 587 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 CARNMT1Q8N4J0 409 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 OR14C36Q8NHC7 312 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 NAF1Q96HR8 494 aaKnown RBP13.56□□□□□ -0.24
COPB1-209ENST00000533096 SERAC1Q96JX3 654 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 PRORYQ9H606 182 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 OLA1Q9NTK5 396 aaKnown RBP13.56□□□□□ -0.24
COPB1-209ENST00000533096 HESX1Q9UBX0 185 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 CEP83Q9Y592 693 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 WDFY3Q8IZQ1 3526 aa13.56□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3DA0A087WVF3 549 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3IA0A087WXS9 549 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3EA0A087X179 549 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3KA0A087X1G2 549 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 A0A1B0GVL5 298 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3FA6NER0 549 aaPredicted RBP13.55□□□□□ -0.24
COPB1-209ENST00000533096 LRRC72A6NJI9 287 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TTC34A8MYJ7 566 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3LB9A6J9 549 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 E9PAM4 449 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 ATXN7O15265 892 aaPredicted RBP13.55□□□□□ -0.24
COPB1-209ENST00000533096 C1QL1O75973 258 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3HP0C7X1 549 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 RGS7P49802 495 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 SFSWAPQ12872 951 aaKnown RBP13.55□□□□□ -0.24
COPB1-209ENST00000533096 KCNJ12Q14500 433 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 PIK3R6Q5UE93 754 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 ARHGAP17Q68EM7 881 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 KRT39Q6A163 491 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3GQ6DHY5 549 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3CQ6IPX1 549 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 MFN1Q8IWA4 741 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TBC1D3Q8IZP1 549 aaPredicted RBP13.55□□□□□ -0.24
COPB1-209ENST00000533096 CFAP52Q8N1V2 620 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 SAP25Q8TEE9 199 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 BAP1Q92560 729 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 RSPH9Q9H1X1 276 aaPredicted RBP13.55□□□□□ -0.24
COPB1-209ENST00000533096 FBRSQ9HAH7 460 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TMEM8AQ9HCN3 771 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 ABCC13Q9NSE7 274 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 RAB20Q9NX57 234 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 PCDHGA1Q9Y5H4 931 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 ITPR1Q14643 2758 aa13.55□□□□□ -0.24
COPB1-209ENST00000533096 TLR4O00206 839 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 CAPN9O14815 690 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 XPO1O14980 1071 aaKnown RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 ACTN4O43707 911 aaKnown RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 C1SP09871 688 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 SLC6A4P31645 630 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 CSKP41240 450 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 CTSOP43234 321 aaPredicted RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 PSMD8P48556 350 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 SLC11A2P49281 568 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 ARRB1P49407 418 aaPredicted RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 CXADRP78310 365 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 LRMPQ12912 555 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 CST6Q15828 149 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 SGO2Q562F6 1265 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 USP30Q70CQ3 517 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 GPR155Q7Z3F1 870 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 KIAA0907Q7Z7F0 614 aaPredicted RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 CCDC117Q8IWD4 279 aaPredicted RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 OR2T34Q8NGX1 318 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 TMEM174Q8WUU8 243 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 FGF11Q92914 225 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 CCDC47Q96A33 483 aaKnown RBP13.54□□□□□ -0.24
COPB1-209ENST00000533096 SLCO3A1Q9UIG8 710 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 TSPAN16Q9UKR8 245 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms