RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CRACR2AQ9BSW2 395 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 TRMT61BQ9BVS5 477 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 TTLL2Q9BWV7 592 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PLA2G2FQ9BZM2 168 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZCCHC2Q9C0B9 1178 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 NAT10Q9H0A0 1025 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SMG9Q9H0W8 520 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MFSD1Q9H3U5 465 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 RUBCNLQ9H714 662 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 BRD9Q9H8M2 597 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 GPAMQ9HCL2 828 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 CSNK1G1Q9HCP0 422 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 TRPC7Q9HCX4 862 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SAMSN1Q9NSI8 373 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 TRPM5Q9NZQ8 1165 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 GCNT4Q9P109 453 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SUCOQ9UBS9 1254 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PCDHB10Q9UN67 800 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 NFE2L3Q9Y4A8 694 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PCDHB4Q9Y5E5 795 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MRFAP1Q9Y605 127 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 DGKBQ9Y6T7 804 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 DENND4AQ7Z401 1863 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 C2orf16Q68DN1 1984 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 MTCL1Q9Y4B5 1905 aaKnown RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 GTPBP10A4D1E9 387 aaKnown RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZNF840PA6NDX5 716 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 PES1O00541 588 aaKnown RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 TNFRSF10CO14798 259 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZNF263O14978 683 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 PIP5K1CO60331 668 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 TADA3O75528 432 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 PRAMEF12O95522 483 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 CKMP06732 381 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 TPM2P07951 284 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 PAEPP09466 180 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 JMJD7P0C870 316 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 RARAP10276 462 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 PABPC1P11940 636 aaKnown RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 PFKLP17858 780 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 HDCP19113 662 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC9A1P19634 815 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ACO1P21399 889 aaKnown RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 GDI1P31150 447 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC5A3P53794 718 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 MFAP3P55082 362 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 MYL5Q02045 173 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 GCNT1Q02742 428 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 TBX2Q13207 712 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 CCINQ13939 588 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 SEPT7Q16181 437 aaKnown RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 EXOC3L4Q17RC7 722 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 GOLGA7BQ2TAP0 167 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 KLHL40Q2TBA0 621 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC44A4Q53GD3 710 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 SGO2Q562F6 1265 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 TCP11X2Q5H9J9 407 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 SAMD5Q5TGI4 173 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 TRIM65Q6PJ69 517 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 RINLQ6ZS11 566 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 CLEC20AQ6ZU45 233 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 C11orf57Q6ZUT1 292 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ENOSF1Q7L5Y1 443 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 SRLQ86TD4 932 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ARHGEF19Q8IW93 802 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 MFSD6LQ8IWD5 586 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 FBXL6Q8N531 539 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ARL14EPQ8N8R7 260 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ANKRD52Q8NB46 1076 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZMIZ2Q8NF64 920 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 FLCNQ8NFG4 579 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 SCAMP5Q8TAC9 235 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 BPIFB1Q8TDL5 484 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 KLHL6Q8WZ60 621 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 IRF7Q92985 503 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 KAT5Q92993 513 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 USP13Q92995 863 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 FBXO32Q969P5 355 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 RSPRY1Q96DX4 576 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 DHRS1Q96LJ7 313 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 TBATAQ96M53 351 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 CYP2S1Q96SQ9 504 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 DUSP16Q9BY84 665 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 CLEC4MQ9H2X3 399 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 NDST4Q9H3R1 872 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 FBXO44Q9H4M3 255 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 PNPLA8Q9NP80 782 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 UBE2TQ9NPD8 197 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 ARHGEF3Q9NR81 526 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 TDP1Q9NUW8 608 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 THG1LQ9NWX6 298 aaKnown RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 COMMD8Q9NX08 183 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 HESX1Q9UBX0 185 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 CHORDC1Q9UHD1 332 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 KIAA1257Q9ULG3 409 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 CA14Q9ULX7 337 aa6.07□□□□□ -1.44
HMGB1P42-201ENST00000532126 CUL9Q8IWT3 2517 aa6.06□□□□□ -1.44
HMGB1P42-201ENST00000532126 MUC3AQ02505 3323 aa6.06□□□□□ -1.44
HMGB1P42-201ENST00000532126 NCANO14594 1321 aa6.06□□□□□ -1.44
HMGB1P42-201ENST00000532126 BDP1A6H8Y1 2624 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms