RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	DACT1	Q9NYF0	836 aa		6.28	□□□□□ -1.4
PUM1-222	ENST00000531867	MRPS17	Q9Y2R5	130 aa	Known RBP	6.28	□□□□□ -1.4
PUM1-222	ENST00000531867	TNPO3	Q9Y5L0	923 aa	Known RBP	6.28	□□□□□ -1.4
PUM1-222	ENST00000531867	IGF2R	P11717	2491 aa		6.28	□□□□□ -1.4
PUM1-222	ENST00000531867	SPAG17	Q6Q759	2223 aa		6.27	□□□□□ -1.4
PUM1-222	ENST00000531867	FLNB	O75369	2602 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	NEMP1	O14524	444 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	ZNF213	O14771	459 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	MAGEB2	O15479	319 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	EPB41L2	O43491	1005 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	TGM5	O43548	720 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	RNASEH2A	O75792	299 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	CCNE2	O96020	404 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	ALDH2	P05091	517 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	POU2F2	P09086	479 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	BPI	P17213	487 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	TYRP1	P17643	537 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	SMARCA1	P28370	1054 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	HOXA6	P31267	233 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	RECQL	P46063	649 aa	Predicted RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	CCT5	P48643	541 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	SCNN1B	P51168	640 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	MECP2	P51608	486 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	CCR3	P51677	355 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	NLRP11	P59045	1033 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	IL13RA1	P78552	427 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	DSG1	Q02413	1049 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	TROAP	Q12815	778 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	SEPT7	Q16181	437 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	AASDH	Q4L235	1098 aa	Predicted RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	IFIT1B	Q5T764	474 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	TPRG1	Q6ZUI0	275 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	GET4	Q7L5D6	327 aa	Predicted RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	LONP2	Q86WA8	852 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	CCDC60	Q8IWA6	550 aa	Predicted RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	CHST14	Q8NCH0	376 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	RNF169	Q8NCN4	708 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	HIPK4	Q8NE63	616 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	ACRBP	Q8NEB7	543 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	FGF13	Q92913	245 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	CUL5	Q93034	780 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	AIFM3	Q96NN9	605 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	GBP4	Q96PP9	640 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	MXRA8	Q9BRK3	442 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	ASH1L	Q9NR48	2969 aa	Known RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	MARCH5	Q9NX47	278 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	SAMD15	Q9P1V8	674 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	FNIP2	Q9P278	1114 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	PHTF1	Q9UMS5	762 aa		6.27	□□□□□ -1.41
PUM1-222	ENST00000531867	MORC2	Q9Y6X9	1032 aa	Predicted RBP	6.27	□□□□□ -1.41
PUM1-222	ENST00000531867		K7ESF4	209 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	NRP1	O14786	923 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	MAF	O75444	373 aa	Predicted RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	ECI2	O75521	394 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	CNOT4	O95628	575 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	MPIG6B	O95866	241 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	UROD	P06132	367 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	JMJD7	P0C870	316 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	SPATA31D3	P0C874	917 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	MYBL2	P10244	700 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	MX1	P20591	662 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	CALR	P27797	417 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	FNTB	P49356	437 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	GLUD2	P49448	558 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	GPC3	P51654	580 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	SATB1	Q01826	763 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	SF3A2	Q15428	464 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	FAM160B1	Q5W0V3	765 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	SPATA31D4	Q6ZUB0	917 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	GPR155	Q7Z3F1	870 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	MRPL10	Q7Z7H8	261 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	DNASE1L2	Q92874	299 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	LPP	Q93052	612 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	SKA1	Q96BD8	255 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	MPP4	Q96JB8	637 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	SDF4	Q9BRK5	362 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	UBAC1	Q9BSL1	405 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	C1QTNF3	Q9BXJ4	246 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	KRTAP9-3	Q9BYQ3	159 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	KRT23	Q9C075	422 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	ZDHHC5	Q9C0B5	715 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	OR10A5	Q9H207	317 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	AGO4	Q9HCK5	861 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	TRPV5	Q9NQA5	729 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	ZNF302	Q9NR11	478 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	HEBP1	Q9NRV9	189 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	KLHL11	Q9NVR0	708 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	UCKL1	Q9NWZ5	548 aa		6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	GCN1	Q92616	2671 aa	Known RBP	6.26	□□□□□ -1.41
PUM1-222	ENST00000531867	PMM2	O15305	246 aa		6.25	□□□□□ -1.41
PUM1-222	ENST00000531867	EPN2	O95208	641 aa		6.25	□□□□□ -1.41
PUM1-222	ENST00000531867	TOP3B	O95985	862 aa	Known RBP	6.25	□□□□□ -1.41
PUM1-222	ENST00000531867	HNRNPA1	P09651	372 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
PUM1-222	ENST00000531867	SETSIP	P0DME0	302 aa		6.25	□□□□□ -1.41
PUM1-222	ENST00000531867	CHRNB1	P11230	501 aa		6.25	□□□□□ -1.41
PUM1-222	ENST00000531867	FGFR4	P22455	802 aa		6.25	□□□□□ -1.41
PUM1-222	ENST00000531867	SERPINB3	P29508	390 aa		6.25	□□□□□ -1.41
PUM1-222	ENST00000531867	HOXA9	P31269	272 aa		6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms