RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TBC1D3DA0A087WVF3 549 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3IA0A087WXS9 549 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3EA0A087X179 549 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3KA0A087X1G2 549 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 A0A1W2PPC4 97 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3FA6NER0 549 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3LB9A6J9 549 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TK2O00142 265 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 PIK3R2O00459 728 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 MID1O15344 667 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 SIN3BO75182 1162 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 C1QL1O75973 258 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 WNT1P04628 370 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 IGHV4-34P06331 123 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3HP0C7X1 549 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 LCP1P13796 627 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 PLA2G2AP14555 144 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 CD38P28907 300 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 SLC8A1P32418 973 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 ARRB1P49407 418 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-206ENST00000531430 NUMBP49757 651 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 CFHR1Q03591 330 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 EHHADHQ08426 723 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 INCA1Q0VD86 236 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TRIP4Q15650 581 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-206ENST00000531430 SLC45A4Q5BKX6 768 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 ADGRF1Q5T601 910 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 BSPRYQ5W0U4 402 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3GQ6DHY5 549 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3CQ6IPX1 549 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 CNNM4Q6P4Q7 775 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 KDM7AQ6ZMT4 941 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TBC1D3Q8IZP1 549 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-206ENST00000531430 ZNF843Q8N446 348 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 CARNMT1Q8N4J0 409 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 RBBP8NLQ8NC74 664 aaPredicted RBP9.62□□□□□ -0.87
NEDD8-206ENST00000531430 OR14C36Q8NHC7 312 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 FGF11Q92914 225 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TMEM176AQ96HP8 235 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 SERAC1Q96JX3 654 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 NIF3L1Q9GZT8 377 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 PABPC3Q9H361 631 aaKnown RBP9.62□□□□□ -0.87
NEDD8-206ENST00000531430 EBF2Q9HAK2 575 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 MAGEF1Q9HAY2 307 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 OLA1Q9NTK5 396 aaKnown RBP9.62□□□□□ -0.87
NEDD8-206ENST00000531430 MAPK8IP1Q9UQF2 711 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 PCDHGA1Q9Y5H4 931 aa9.62□□□□□ -0.87
NEDD8-206ENST00000531430 TLR4O00206 839 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 TULP2O00295 520 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 PDXKO00764 312 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 WNT9AO14904 365 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 MSI1O43347 362 aaKnown RBP9.61□□□□□ -0.87
NEDD8-206ENST00000531430 BRINP1O60477 761 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 C1SP09871 688 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 CDK4P11802 303 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 CD19P15391 556 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 GLDCP23378 1020 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 ACTN2P35609 894 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 PSMD8P48556 350 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 SLC11A2P49281 568 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 SGSHP51688 502 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 PPP3CAQ08209 521 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 GOLGA7BQ2TAP0 167 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 C1orf220Q5T0J3 134 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-206ENST00000531430 SLC9A9Q8IVB4 645 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 MFN1Q8IWA4 741 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 ZC3H3Q8IXZ2 948 aaKnown RBP9.61□□□□□ -0.87
NEDD8-206ENST00000531430 FAM186BQ8IYM0 893 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 SIX6OS1Q8N1H7 587 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 ANKRD52Q8NB46 1076 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 SLC4A11Q8NBS3 891 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 KIAA0895Q8NCT3 520 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 SAP25Q8TEE9 199 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 TATDN2Q93075 761 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 PAGE5Q96GU1 130 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 LGMNQ99538 433 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 UBXN6Q9BZV1 441 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 RSPH9Q9H1X1 276 aaPredicted RBP9.61□□□□□ -0.87
NEDD8-206ENST00000531430 FBRSQ9HAH7 460 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 CISHQ9NSE2 258 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 SERGEFQ9UGK8 458 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 CLCA2Q9UQC9 943 aa9.61□□□□□ -0.87
NEDD8-206ENST00000531430 HBS1LQ9Y450 684 aaKnown RBP9.61□□□□□ -0.87
NEDD8-206ENST00000531430 YJEFN3A6XGL0 299 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 TTC34A8MYJ7 566 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 E7ENQ6 273 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 PYCARD-AS1I3L0S3 204 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 J3QKU1 62 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 SDC3O75056 442 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 IL1BP01584 269 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 SLFN14P0C7P3 912 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 NR2F2P24468 414 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 MAT2AP31153 395 aaKnown RBP9.6□□□□□ -0.87
NEDD8-206ENST00000531430 CSKP41240 450 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 ACADVLP49748 655 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 RGS7P49802 495 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 RAD23BP54727 409 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms