RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 IL37Q9NZH6 218 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 TJP2Q9UDY2 1190 aa8.64□□□□□ -1.03
CD44-232ENST00000531118 SPENQ96T58 3664 aaKnown RBP8.63□□□□□ -1.03
CD44-232ENST00000531118 CLEC18AA5D8T8 446 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 ENO4A6NNW6 628 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 TACC1O75410 805 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 TBX18O95935 607 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 KRT18P05783 430 aaKnown RBP8.63□□□□□ -1.03
CD44-232ENST00000531118 PTPN1P18031 435 aaKnown RBP8.63□□□□□ -1.03
CD44-232ENST00000531118 ITGB6P18564 788 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 CD38P28907 300 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 RXRGP48443 463 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 TOB1P50616 345 aaPredicted RBP8.63□□□□□ -1.03
CD44-232ENST00000531118 ASIC1P78348 528 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 DAB2P98082 770 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 SERINC3Q13530 473 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 POSTNQ15063 836 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 FNDC3BQ53EP0 1204 aaKnown RBP8.63□□□□□ -1.03
CD44-232ENST00000531118 C3orf38Q5JPI3 329 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 TMEM215Q68D42 235 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 ZNF776Q68DI1 518 aaPredicted RBP8.63□□□□□ -1.03
CD44-232ENST00000531118 CLEC18BQ6UXF7 455 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 CCDC83Q8IWF9 413 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 CLEC18CQ8NCF0 446 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 OR5B17Q8NGF7 314 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 OR6B3Q8NGW1 331 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 KCNK16Q96T55 309 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 TMEM245Q9H330 911 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 EBF2Q9HAK2 575 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 CYLDQ9NQC7 956 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 KRT82Q9NSB4 513 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 HSPBP1Q9NZL4 362 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 CLEC4EQ9ULY5 219 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
CD44-232ENST00000531118 RP1P56715 2156 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 CACNA1DQ01668 2161 aa8.63□□□□□ -1.03
CD44-232ENST00000531118 A0A1W2PNU3 283 aaPredicted RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 GOLGA8IPA6NC78 632 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 FAM47DPA6NHR8 397 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 GOLGA8JA6NMD2 632 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 TRIM38O00635 465 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 WNT9AO14904 365 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 SIGLEC6O43699 453 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 LZTS3O60299 673 aaPredicted RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 OPA1O60313 960 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 SDC3O75056 442 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 STC2O76061 302 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 TNNC2P02585 160 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 GNL1P36915 607 aaPredicted RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 ARID5AQ03989 594 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 CLN3Q13286 438 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 DHX8Q14562 1220 aaKnown RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 ZSCAN23Q3MJ62 389 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 C4orf17Q53FE4 359 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 NCEH1Q6PIU2 408 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 SFR1Q86XK3 245 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 NOC3LQ8WTT2 800 aaKnown RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 CCDC97Q96F63 343 aaPredicted RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 SMARCD1Q96GM5 515 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 PABPC3Q9H361 631 aaKnown RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 TLR8Q9NR97 1041 aaKnown RBP8.62□□□□□ -1.03
CD44-232ENST00000531118 BLOC1S4Q9NUP1 217 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 INTS13Q9NVM9 706 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 COMMD8Q9NX08 183 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 OSER1Q9NX31 292 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 SERGEFQ9UGK8 458 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 SEPT3Q9UH03 358 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 SATB2Q9UPW6 733 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 MAN2B2Q9Y2E5 1009 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 ITPR2Q14571 2701 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 SCN8AQ9UQD0 1980 aa8.62□□□□□ -1.03
CD44-232ENST00000531118 A0A1B0GVM2 712 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 A8MXQ7 604 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 C10orf142B7Z368 130 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 CYP26A1O43174 497 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 LDHAP00338 332 aaKnown RBP8.61□□□□□ -1.03
CD44-232ENST00000531118 FAM87AP0C7U9 286 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 TIMP2P16035 220 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 GARTP22102 1010 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 ATP5C1P36542 298 aaKnown RBP8.61□□□□□ -1.03
CD44-232ENST00000531118 CCR10P46092 362 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 WDR4P57081 412 aaKnown RBP8.61□□□□□ -1.03
CD44-232ENST00000531118 TNNC1P63316 161 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 KCNA1Q09470 495 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 ARL13BQ3SXY8 428 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 SLC45A4Q5BKX6 768 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 L1TD1Q5T7N2 865 aaKnown RBP8.61□□□□□ -1.03
CD44-232ENST00000531118 KLHDC10Q6PID8 442 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 XKR5Q6UX68 686 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 PAQR9Q6ZVX9 377 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 USP30Q70CQ3 517 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 DYMQ7RTS9 669 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 SPATS2Q86XZ4 545 aaKnown RBP8.61□□□□□ -1.03
CD44-232ENST00000531118 ZMIZ2Q8NF64 920 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 WFIKKN2Q8TEU8 576 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 CYB5D2Q8WUJ1 264 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 GOLGA1Q92805 767 aa8.61□□□□□ -1.03
CD44-232ENST00000531118 EXTL1Q92935 676 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms