RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 RIPOR3Q96MK2 946 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 CSPG4P5Q96PW8 444 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 AP1M1Q9BXS5 423 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 OSBPL8Q9BZF1 889 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 TDP1Q9NUW8 608 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 ETNK2Q9NVF9 386 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 SAE1Q9UBE0 346 aaPredicted RBP11.01□□□□□ -0.65
SOX6-213ENST00000530378 ARHGAP26Q9UNA1 814 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 MRFAP1Q9Y605 127 aa11.01□□□□□ -0.65
SOX6-213ENST00000530378 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
SOX6-213ENST00000530378 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
SOX6-213ENST00000530378 E9PAM4 449 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PGRMC1O00264 195 aaKnown RBP11□□□□□ -0.65
SOX6-213ENST00000530378 DAPK3O43293 454 aa11□□□□□ -0.65
SOX6-213ENST00000530378 ACSL4O60488 711 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PAPLNO95428 1278 aa11□□□□□ -0.65
SOX6-213ENST00000530378 TUBB4AP04350 444 aa11□□□□□ -0.65
SOX6-213ENST00000530378 TACR2P21452 398 aa11□□□□□ -0.65
SOX6-213ENST00000530378 IL4RP24394 825 aa11□□□□□ -0.65
SOX6-213ENST00000530378 ARL4AP40617 200 aa11□□□□□ -0.65
SOX6-213ENST00000530378 AUHQ13825 339 aaKnown RBP11□□□□□ -0.65
SOX6-213ENST00000530378 COL19A1Q14993 1142 aa11□□□□□ -0.65
SOX6-213ENST00000530378 LONRF2Q1L5Z9 754 aa11□□□□□ -0.65
SOX6-213ENST00000530378 ANKRD20A8PQ5CZ79 823 aa11□□□□□ -0.65
SOX6-213ENST00000530378 TFDP3Q5H9I0 405 aa11□□□□□ -0.65
SOX6-213ENST00000530378 FBXL22Q6P050 247 aa11□□□□□ -0.65
SOX6-213ENST00000530378 NPNTQ6UXI9 565 aa11□□□□□ -0.65
SOX6-213ENST00000530378 B4GALNT4Q76KP1 1039 aa11□□□□□ -0.65
SOX6-213ENST00000530378 CREG2Q8IUH2 290 aa11□□□□□ -0.65
SOX6-213ENST00000530378 UNC45BQ8IWX7 931 aa11□□□□□ -0.65
SOX6-213ENST00000530378 LRRN4CLQ8ND94 238 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PCDH19Q8TAB3 1148 aa11□□□□□ -0.65
SOX6-213ENST00000530378 TRAF3IP1Q8TDR0 691 aaPredicted RBP11□□□□□ -0.65
SOX6-213ENST00000530378 IGSF8Q969P0 613 aa11□□□□□ -0.65
SOX6-213ENST00000530378 ZFYVE19Q96K21 471 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PBKQ96KB5 322 aa11□□□□□ -0.65
SOX6-213ENST00000530378 RPRD1AQ96P16 312 aaPredicted RBP11□□□□□ -0.65
SOX6-213ENST00000530378 LRRC3BQ96PB8 259 aa11□□□□□ -0.65
SOX6-213ENST00000530378 EPAS1Q99814 870 aa11□□□□□ -0.65
SOX6-213ENST00000530378 KXD1Q9BQD3 176 aa11□□□□□ -0.65
SOX6-213ENST00000530378 SLC12A6Q9UHW9 1150 aa11□□□□□ -0.65
SOX6-213ENST00000530378 LSM7Q9UK45 103 aaKnown RBP11□□□□□ -0.65
SOX6-213ENST00000530378 NR2E1Q9Y466 385 aa11□□□□□ -0.65
SOX6-213ENST00000530378 WNT6Q9Y6F9 365 aa11□□□□□ -0.65
SOX6-213ENST00000530378 H3BRJ5 948 aa11□□□□□ -0.65
SOX6-213ENST00000530378 GREM1O60565 184 aa11□□□□□ -0.65
SOX6-213ENST00000530378 CST8O60676 142 aa11□□□□□ -0.65
SOX6-213ENST00000530378 CNTN5O94779 1100 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PECAM1P16284 738 aaPredicted RBP11□□□□□ -0.65
SOX6-213ENST00000530378 EPHB2P29323 1055 aa11□□□□□ -0.65
SOX6-213ENST00000530378 SLC11A2P49281 568 aa11□□□□□ -0.65
SOX6-213ENST00000530378 RPS24P62847 133 aaKnown RBP11□□□□□ -0.65
SOX6-213ENST00000530378 C2orf54Q08AI8 447 aa11□□□□□ -0.65
SOX6-213ENST00000530378 SEMA3BQ13214 749 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PDK2Q15119 407 aa11□□□□□ -0.65
SOX6-213ENST00000530378 ZNF77Q15935 545 aa11□□□□□ -0.65
SOX6-213ENST00000530378 C1orf228Q6PIY5 440 aa11□□□□□ -0.65
SOX6-213ENST00000530378 TPGS1Q6ZTW0 290 aa11□□□□□ -0.65
SOX6-213ENST00000530378 RFX8Q6ZV50 586 aa11□□□□□ -0.65
SOX6-213ENST00000530378 SLC13A5Q86YT5 568 aaPredicted RBP11□□□□□ -0.65
SOX6-213ENST00000530378 PHF6Q8IWS0 365 aaKnown RBP eCLIP11□□□□□ -0.65
SOX6-213ENST00000530378 ZDHHC14Q8IZN3 488 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PQLC3Q8N755 202 aa11□□□□□ -0.65
SOX6-213ENST00000530378 ATG4AQ8WYN0 398 aa11□□□□□ -0.65
SOX6-213ENST00000530378 TSC1Q92574 1164 aa11□□□□□ -0.65
SOX6-213ENST00000530378 SMARCD2Q92925 531 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PRICKLE1Q96MT3 831 aaPredicted RBP11□□□□□ -0.65
SOX6-213ENST00000530378 ASB16Q96NS5 453 aa11□□□□□ -0.65
SOX6-213ENST00000530378 HAPLN3Q96S86 360 aa11□□□□□ -0.65
SOX6-213ENST00000530378 ARHGEF4Q9NR80 690 aa11□□□□□ -0.65
SOX6-213ENST00000530378 PLK2Q9NYY3 685 aa11□□□□□ -0.65
SOX6-213ENST00000530378 STIM2Q9P246 746 aa11□□□□□ -0.65
SOX6-213ENST00000530378 CDC23Q9UJX2 597 aa11□□□□□ -0.65
SOX6-213ENST00000530378 CDH7Q9ULB5 785 aa11□□□□□ -0.65
SOX6-213ENST00000530378 NEU3Q9UQ49 428 aa11□□□□□ -0.65
SOX6-213ENST00000530378 R3HDM2Q9Y2K5 976 aaKnown RBP11□□□□□ -0.65
SOX6-213ENST00000530378 NYNRINQ9P2P1 1898 aaKnown RBP10.99□□□□□ -0.65
SOX6-213ENST00000530378 MIA3Q5JRA6 1907 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.99□□□□□ -0.65
SOX6-213ENST00000530378 F5H5T6 163 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 MTHFRP42898 656 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 AIF1P55008 147 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 TFF2Q03403 129 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 USP4Q13107 963 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 GRM2Q14416 872 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 ALFQ53S48 1182 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 TRIM68Q6AZZ1 485 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 Q6ZNB5 142 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 MAP7D3Q8IWC1 876 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 TP53INP2Q8IXH6 220 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 C1orf54Q8WWF1 131 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 TBC1D31Q96DN5 1066 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 P2RY11Q96G91 374 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 PRMT1Q99873 361 aaKnown RBP10.99□□□□□ -0.65
SOX6-213ENST00000530378 ZNF670Q9BS34 389 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 MAK16Q9BXY0 300 aaKnown RBP10.99□□□□□ -0.65
SOX6-213ENST00000530378 HEY1Q9Y5J3 304 aa10.99□□□□□ -0.65
SOX6-213ENST00000530378 MFSD11O43934 449 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 ERCC2P18074 760 aa10.98□□□□□ -0.65
SOX6-213ENST00000530378 FCARP24071 287 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms