RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 ITFG1Q8TB96 612 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 PPP1R14BQ96C90 147 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 APOL4Q9BPW4 351 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 KLK14Q9P0G3 267 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 DAGLAQ9Y4D2 1042 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 FAM205AQ6ZU69 1335 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 H3BN98 237 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 PLA2G6O60733 806 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 MMP10P09238 476 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 RBP1P09455 135 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 NR1H2P55055 460 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 CYP4F2P78329 520 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 CYP4F3Q08477 520 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 EARS2Q5JPH6 523 aaKnown RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 MFSD7Q6UXD7 560 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 RXFP2Q8WXD0 754 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 TMEM106CQ9BVX2 250 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 RGS18Q9NS28 235 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 RAD18Q9NS91 495 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 TRNAU1APQ9NX07 287 aaKnown RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 SAE1Q9UBE0 346 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 AP4E1Q9UPM8 1137 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 SHOC2Q9UQ13 582 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 DPPA5A6NC42 116 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 S100A9P06702 114 aaKnown RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 RFX5P48382 616 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 ST3GAL1Q11201 340 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 PDIA6Q15084 440 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 KYAT1Q16773 422 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 SBK1Q52WX2 424 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 RNF43Q68DV7 783 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 KRT77Q7Z794 578 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 C8orf59Q8N0T1 100 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 AHI1Q8N157 1196 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 DPP10Q8N608 796 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 KLHL23Q8NBE8 558 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 FRMD8P1Q9BZ68 369 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 DPY30Q9C005 99 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 SLC7A5P2Q9GIP4 190 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 FBXO6Q9NRD1 293 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 AK5Q9Y6K8 562 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 MGAT4DA6NG13 374 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 PIGNO95427 931 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 PCNAP12004 261 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 ALADP13716 330 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 ACO1P21399 889 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 MAGEA10P43363 369 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CWF19L1Q69YN2 538 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 SLC30A10Q6XR72 485 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 FAM126BQ8IXS8 530 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 ZNF512Q96ME7 567 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 KCNK4Q9NYG8 393 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 SH3BGRLO75368 114 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CYP2F1P24903 491 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CCR3P51677 355 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 PDK2Q15119 407 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 EFCAB12Q6NXP0 572 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 TMC7Q7Z402 723 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 HTRA1Q92743 480 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 OTUD5Q96G74 571 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CELF6Q96J87 481 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 DUSP9Q99956 384 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CINPQ9BW66 212 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 POMKQ9H5K3 350 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 ZNF222Q9UK12 451 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 PADI4Q9UM07 663 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 AP4B1Q9Y6B7 739 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 FER1L4A9Z1Z3 1794 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CCNT2O60583 730 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 NPM3O75607 178 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 IL18RAPO95256 599 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CALCAP01258 141 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 SKIV2L2P42285 1042 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 SOX10P56693 466 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 MGAT5BQ3V5L5 792 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 FGD3Q5JSP0 725 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 SAMD4BQ5PRF9 694 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 LDLRAP1Q5SW96 308 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 PRMT9Q6P2P2 845 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 SLFN11Q7Z7L1 901 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 ZNF605Q86T29 641 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 HIPK1Q86Z02 1210 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 MCOLN2Q8IZK6 566 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 TBC1D19Q8N5T2 526 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 MTIF3Q9H2K0 278 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 AAR2Q9Y312 384 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 TFECO14948 347 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 USP12O75317 370 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 MPOP05164 745 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 TSPAN19P0C672 248 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CHKAP35790 457 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 HALP42357 657 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 IDH2P48735 452 aaKnown RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 NPY2RP49146 381 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 HIST2H2ACQ16777 129 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-223ENST00000529986 C10orf120Q5SQS8 335 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 HIST2H2AA3Q6FI13 130 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 CASP12Q6UXS9 341 aa7.79□□□□□ -1.16
CTNND1-223ENST00000529986 ZNF276Q8N554 614 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms