RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 TEDDM1Q5T9Z0 273 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 MROH9Q5TGP6 573 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 APTXQ7Z2E3 356 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 RASGEF1CQ8N431 466 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ALLCQ8N6M5 410 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 C2orf15Q8WU43 125 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 SH3KBP1Q96B97 665 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 FAR2Q96K12 515 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 MANSC1Q9H8J5 431 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SYTL2Q9HCH5 934 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SIX2Q9NPC8 291 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 LATS2Q9NRM7 1088 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CHST7Q9NS84 486 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 TMEM161AQ9NX61 479 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 UBA2Q9UBT2 640 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 MSRAQ9UJ68 235 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 TRMT6Q9UJA5 497 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 NOCTQ9UK39 431 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 ZNF510Q9Y2H8 683 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 STXBP5LQ9Y2K9 1186 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 TMEM247A6NEH6 219 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ZSCAN5CA6NGD5 496 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 ARVCFO00192 962 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 KLHL2O95198 593 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 IGSF6O95976 241 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 FAM107AO95990 144 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 RBP1P09455 135 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 KITP10721 976 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 PECAM1P16284 738 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 STMN1P16949 149 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 KRT4P19013 534 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 HMOX2P30519 316 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 RPL7AP62424 266 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 EFTUD2Q15029 972 aaKnown RBP eCLIP4.8□□□□□ -1.64
CASP4-207ENST00000529565 PDPK2PQ6A1A2 396 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ILDR2Q71H61 639 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 TTC30AQ86WT1 665 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 XYLT1Q86Y38 959 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 MFN1Q8IWA4 741 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 C12orf29Q8N999 325 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SLC4A11Q8NBS3 891 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ADAM32Q8TC27 787 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ZNF473Q8WTR7 871 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 SNX19Q92543 992 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CELF6Q96J87 481 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 ZYG11BQ9C0D3 744 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 POLR1EQ9GZS1 481 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 ASAH2Q9NR71 780 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 PLA2G4CQ9UP65 541 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 THSD7AQ9UPZ6 1657 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 CCDC78A2IDD5 438 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ARL5CA6NH57 179 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CASQ2O14958 399 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 GLP2RO95838 553 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CHRM3P20309 590 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CES1P23141 567 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 RBL1P28749 1068 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SCNN1AP37088 669 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 GP5P40197 560 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ELK3P41970 407 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CASP2P42575 452 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 MMP13P45452 471 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 APLP1P51693 650 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 PURAQ00577 322 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 ZC3H12AQ5D1E8 599 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 GRTP1Q5TC63 336 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 RFX8Q6ZV50 586 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SETD3Q86TU7 594 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 SUGP1Q8IWZ8 645 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 MREGQ8N565 214 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 PRELID2Q8N945 189 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 LENG1Q96BZ8 264 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 PGM2Q96G03 612 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 C2orf49Q9BVC5 232 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 PHACTR1Q9C0D0 580 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SEMA4AQ9H3S1 761 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ADAM28Q9UKQ2 775 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 L3MBTL1Q9Y468 752 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 TCHHQ07283 1943 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 PDE2AO00408 941 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 CFLARO15519 480 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SRP72O76094 671 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 CALCAP01258 141 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 MPOP05164 745 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ABHD2P08910 425 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 GRK2P25098 689 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CDC25CP30307 473 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CTNNB1P35222 781 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SCNN1BP51168 640 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 IRAK1P51617 712 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 PRKAA2P54646 552 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 DNAJC3Q13217 504 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 SMAD1Q15797 465 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 ZNF284Q2VY69 593 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 DNAJC14Q6Y2X3 702 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 TFAP2DQ7Z6R9 452 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 DDIASQ8IXT1 998 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 HJURPQ8NCD3 748 aaPredicted RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 EPS8L3Q8TE67 593 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms