RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	CTNNAL1	Q9UBT7	734 aa		15.07	■□□□□ 0
NR1H3-231	ENST00000529540	CHORDC1	Q9UHD1	332 aa	Predicted RBP	15.07	■□□□□ 0
NR1H3-231	ENST00000529540	SLC27A5	Q9Y2P5	690 aa		15.07	■□□□□ 0
NR1H3-231	ENST00000529540	STARD13	Q9Y3M8	1113 aa		15.07	■□□□□ 0
NR1H3-231	ENST00000529540	SIGLEC16	A6NMB1	481 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	TNFRSF10B	O14763	440 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	PAPSS1	O43252	624 aa	Predicted RBP	15.06	■□□□□ 0
NR1H3-231	ENST00000529540	PPP3CC	P48454	512 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	IL9R	Q01113	521 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	MAMLD1	Q13495	774 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	KYNU	Q16719	465 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	DDR2	Q16832	855 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	CMPK2	Q5EBM0	449 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	SPDYA	Q5MJ70	313 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	CYP4A22	Q5TCH4	519 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	OLFML1	Q6UWY5	402 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	BEND5	Q7L4P6	421 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	AGGF1	Q8N302	714 aa	eCLIP	15.06	■□□□□ 0
NR1H3-231	ENST00000529540	FNIP1	Q8TF40	1166 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	OVCA2	Q8WZ82	227 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	TMEM237	Q96Q45	408 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	LRMDA	Q9H2I8	198 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	NSUN3	Q9H649	340 aa	Known RBP	15.06	■□□□□ 0
NR1H3-231	ENST00000529540	TMEM30A	Q9NV96	361 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	IL37	Q9NZH6	218 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	NAALADL1	Q9UQQ1	740 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	CCDC189	A1A4V9	331 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	FAM170A	A1A519	330 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	FAM92A	A1XBS5	289 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540		E7ENQ6	273 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	DIAPH2	O60879	1101 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	CLASP2	O75122	1294 aa	Known RBP	15.06	■□□□□ 0
NR1H3-231	ENST00000529540	LUC7L3	O95232	432 aa	Known RBP	15.06	■□□□□ 0
NR1H3-231	ENST00000529540	SEC24A	O95486	1093 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	C8A	P07357	584 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	POU2F2	P09086	479 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	HNRNPA1	P09651	372 aa	Known RBP eCLIP	15.06	■□□□□ 0
NR1H3-231	ENST00000529540	PAX7	P23759	505 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	YWHAQ	P27348	245 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	DAOA	P59103	153 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	DUSP6	Q16828	381 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	PPM1L	Q5SGD2	360 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	ZNF697	Q5TEC3	545 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	FAM183BP	Q6ZVS7	135 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	MON1A	Q86VX9	555 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	TDRP	Q86YL5	185 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	SCUBE3	Q8IX30	993 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	CYP4X1	Q8N118	509 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	KIF2B	Q8N4N8	673 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	TTC9B	Q8N6N2	239 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	GDAP1	Q8TB36	358 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	SLC7A14	Q8TBB6	771 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	FEZF2	Q8TBJ5	459 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	MAML1	Q92585	1016 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	PRCC	Q92733	491 aa	Predicted RBP	15.06	■□□□□ 0
NR1H3-231	ENST00000529540	INPP5D	Q92835	1189 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	TRMT2B	Q96GJ1	504 aa	Known RBP	15.06	■□□□□ 0
NR1H3-231	ENST00000529540	TTLL2	Q9BWV7	592 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	ULBP1	Q9BZM6	244 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	CRISPLD1	Q9H336	500 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	ZDHHC7	Q9NXF8	308 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	RRN3	Q9NYV6	651 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	GGT7	Q9UJ14	662 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	SCML2	Q9UQR0	700 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	PATJ	Q8NI35	1801 aa		15.06	■□□□□ 0
NR1H3-231	ENST00000529540	FAM47DP	A6NHR8	397 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	SLC38A8	A6NNN8	435 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540		A8MUI8	341 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	PRPF4	O43172	522 aa	Known RBP eCLIP	15.05	■□□□□ -0	1e-6	■■■□□ 14.9
NR1H3-231	ENST00000529540	FGF19	O95750	216 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	ATF6	P18850	670 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	FOXN2	P32314	431 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	TWF1	Q12792	350 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	KLF1	Q13351	362 aa	Predicted RBP	15.05	■□□□□ -0
NR1H3-231	ENST00000529540	SNX1	Q13596	522 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	ACAP1	Q15027	740 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	ZKSCAN8	Q15776	578 aa	Predicted RBP	15.05	■□□□□ -0
NR1H3-231	ENST00000529540	CCNG2	Q16589	344 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	LEMD2	Q8NC56	503 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	CASP10	Q92851	521 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	PSMG2	Q969U7	264 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	MYRFL	Q96LU7	910 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	CDK5RAP1	Q96SZ6	601 aa	Known RBP	15.05	■□□□□ -0
NR1H3-231	ENST00000529540	POPDC2	Q9HBU9	364 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	DZANK1	Q9NVP4	752 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	IP6K2	Q9UHH9	426 aa		15.05	■□□□□ -0
NR1H3-231	ENST00000529540	RPL26L1	Q9UNX3	145 aa	Known RBP	15.05	■□□□□ -0
NR1H3-231	ENST00000529540	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	15.05	■□□□□ -0
NR1H3-231	ENST00000529540	TCRBV5S1A1T	A0A578	114 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	GOLGA8S	H3BPF8	625 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	PSTPIP1	O43586	416 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	XYLB	O75191	536 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	CSPG5	O95196	566 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	YWHAZ	P63104	245 aa	Known RBP	15.04	■□□□□ -0
NR1H3-231	ENST00000529540	PPP1R15B	Q5SWA1	713 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	GPR153	Q6NV75	609 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	GPRIN1	Q7Z2K8	1008 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	ZCCHC9	Q8N567	271 aa	Known RBP	15.04	■□□□□ -0
NR1H3-231	ENST00000529540	CCDC89	Q8N998	374 aa		15.04	■□□□□ -0
NR1H3-231	ENST00000529540	CFAP61	Q8NHU2	1237 aa		15.04	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms