RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 BMPR2Q13873 1038 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 TBCCQ15814 346 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 CNTROBQ8N137 903 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 GLIS1Q8NBF1 620 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 SMCR8Q8TEV9 937 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-212ENST00000529046 CTHRC1Q96CG8 243 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 UROC1Q96N76 676 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 UTP14AQ9BVJ6 771 aaKnown RBP5.53□□□□□ -1.52
CSDE1-212ENST00000529046 CHMP4AQ9BY43 222 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 TMX4Q9H1E5 349 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-212ENST00000529046 ZBTB26Q9HCK0 441 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 PLCB1Q9NQ66 1216 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 IL17RBQ9NRM6 502 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 ASB6Q9NWX5 421 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 RGL1Q9NZL6 768 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 DKK3Q9UBP4 350 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 COMMD10Q9Y6G5 202 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 ABCC12Q96J65 1359 aa5.53□□□□□ -1.52
CSDE1-212ENST00000529046 M0R3H8 397 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 AGPSO00116 658 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 DHHO43323 396 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 CBFA2T3O75081 653 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 C1QL1O75973 258 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 ARP10275 920 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 MYL6BP14649 208 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 MST1P26927 711 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 ITPKBP27987 946 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 EPHA3P29320 983 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 HTR7P34969 479 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 LIPAP38571 399 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 PRKAG1P54619 331 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 MAP2K1Q02750 393 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-212ENST00000529046 KCNAB1Q14722 419 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 CLCA4Q14CN2 919 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 SLC5A9Q2M3M2 681 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 DEFB115Q30KQ5 88 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 COLEC12Q5KU26 742 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 CACHD1Q5VU97 1274 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 RRAGBQ5VZM2 374 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 MBD3L2Q8NHZ7 208 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-212ENST00000529046 RP9Q8TA86 221 aaKnown RBP5.52□□□□□ -1.53
CSDE1-212ENST00000529046 GLG1Q92896 1179 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 SNX27Q96L92 541 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 WDR24Q96S15 920 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 C17orf80Q9BSJ5 609 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 VN1R3Q9BXE9 311 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 ARFGAP3Q9NP61 516 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 TBC1D23Q9NUY8 699 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 DNAJB11Q9UBS4 358 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 DBF4Q9UBU7 674 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-212ENST00000529046 HPSEQ9Y251 543 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 PCDHGB2Q9Y5G2 931 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 ENTPD2Q9Y5L3 495 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 NUP98P52948 1817 aa5.52□□□□□ -1.53
CSDE1-212ENST00000529046 SH3TC1Q8TE82 1336 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 DLG5Q8TDM6 1919 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 LRRC3CA6NJW4 275 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 ADAMTS3O15072 1205 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 PROP1O75360 226 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 PEX14O75381 377 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 RASAL1O95294 804 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 ZNF853P0CG23 659 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 ZFXP17010 805 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-212ENST00000529046 CTCFP49711 727 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-212ENST00000529046 NHLH1Q02575 133 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 GRAPQ13588 217 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 TNIP1Q15025 636 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 MAPKAPK3Q16644 382 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 LY6KQ17RY6 165 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 TREML2Q5T2D2 321 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 DEPDC1Q5TB30 811 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 SLC9A4Q6AI14 798 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 MRNIPQ6NTE8 343 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 OLFM4Q6UX06 510 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 COPS6Q7L5N1 327 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 WDR53Q7Z5U6 358 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-212ENST00000529046 NGEFQ8N5V2 710 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 ACRBPQ8NEB7 543 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 GRAPLQ8TC17 118 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-212ENST00000529046 TMEM171Q8WVE6 324 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 TIMP4Q99727 224 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 THAP7Q9BT49 309 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-212ENST00000529046 THUMPD2Q9BTF0 503 aaKnown RBP5.51□□□□□ -1.53
CSDE1-212ENST00000529046 INO80BQ9C086 356 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-212ENST00000529046 GLOD4Q9HC38 313 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 CPNE5Q9HCH3 593 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 HYPKQ9NX55 129 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 ARPP21Q9UBL0 812 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-212ENST00000529046 RIMKLBQ9ULI2 386 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 PCSK5Q92824 1860 aa5.51□□□□□ -1.53
CSDE1-212ENST00000529046 A0A087WV62 115 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 FAM234BA2RU67 622 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 GOLGA6L3A6NEY3 463 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 URI1O94763 535 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-212ENST00000529046 NDST3O95803 873 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 HGFP14210 728 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 EIF2S2P20042 333 aaKnown RBP5.5□□□□□ -1.53
CSDE1-212ENST00000529046 GPD1P21695 349 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 GPTP24298 496 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 PRKAR1BP31321 381 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms