RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 PCDHGA5Q9Y5G8 931 aa7.51□□□□□ -1.21
FDFT1-213ENST00000528729 PCDHGA1Q9Y5H4 931 aa7.51□□□□□ -1.21
FDFT1-213ENST00000528729 XRN1Q8IZH2 1706 aaKnown RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 NRXN3Q9Y4C0 1643 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 A0A0A6YYJ9 748 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 PRAMEF22A3QJZ6 481 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 ZSCAN5CA6NGD5 496 aaPredicted RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 C22orf46C9J442 243 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 AXIN1O15169 862 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 PRPF4O43172 522 aaKnown RBP eCLIP7.5□□□□□ -1.219e-6■□□□□ 10.5
FDFT1-213ENST00000528729 SEC24DO94855 1032 aaPredicted RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 TUBBP07437 444 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 ABCB1P08183 1280 aaPredicted RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 INHBAP08476 426 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 CD9P21926 228 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 TNFRSF8P28908 595 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 ASPAP45381 313 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 RGS3P49796 1198 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 CPT1AP50416 773 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 TUBB4BP68371 445 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 POU6F2P78424 691 aaPredicted RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 RNASELQ05823 741 aaKnown RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 PPATQ06203 517 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 RUNX1T1Q06455 604 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 TDGQ13569 410 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 GAS6Q14393 721 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 MXD4Q14582 209 aaPredicted RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.5□□□□□ -1.213e-7■□□□□ 10.6
FDFT1-213ENST00000528729 USP39Q53GS9 565 aaKnown RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 MROH9Q5TGP6 573 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 PRAMEF18Q5VWM3 479 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 CES4AQ5XG92 561 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 SLC25A24Q6NUK1 477 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 TTI2Q6NXR4 508 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 ARHGAP11AQ6P4F7 1023 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 TMC5Q6UXY8 1006 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 FAM160B2Q86V87 743 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 FAM129CQ86XR2 697 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 VPS52Q8N1B4 723 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 ANKRD44Q8N8A2 993 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 OR56B2PQ8NGI1 322 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 NEK9Q8TD19 979 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 DCAF11Q8TEB1 546 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 MAP6Q96JE9 813 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 CFAP57Q96MR6 1250 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 SYT17Q9BSW7 474 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 HTATIP2Q9BUP3 242 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 PCED1AQ9H1Q7 454 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 DPH5Q9H2P9 285 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 SEC63Q9UGP8 760 aaKnown RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 ANAPC2Q9UJX6 822 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 CHKBQ9Y259 395 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 MRPL11Q9Y3B7 192 aaKnown RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 PCDHA5Q9Y5H7 936 aa7.5□□□□□ -1.21
FDFT1-213ENST00000528729 MYBBP1AQ9BQG0 1328 aaKnown RBP7.5□□□□□ -1.21
FDFT1-213ENST00000528729 SPHKAPQ2M3C7 1700 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 CLTCL1P53675 1640 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 TRBC2A0A5B9 178 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 MEGF11A6BM72 1044 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 OR6C76A6NM76 312 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 RAB27BO00194 218 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 O00370 1275 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 SEPT4O43236 478 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 CA12O43570 354 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 VIPP01282 170 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 ENDOUP21128 410 aaKnown RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 PAX7P23759 505 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 MCM3P25205 808 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 ECHS1P30084 290 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 CD68P34810 354 aaPredicted RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 KIR3DL1P43629 444 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 CAMLGP49069 296 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 WNT3P56703 355 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 WNT3AP56704 352 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 SOX4Q06945 474 aaPredicted RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 PDCLQ13371 301 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 SNTB1Q13884 538 aaKnown RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 SCARF1Q14162 830 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 GRM4Q14833 912 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 HFEQ30201 348 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 EMC4Q5J8M3 183 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 CST9LP1Q5W188 147 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 PLAG1Q6DJT9 500 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 ETFRF1Q6IPR1 90 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 SARM1Q6SZW1 724 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 GBP6Q6ZN66 633 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 ERN2Q76MJ5 926 aaKnown RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 CACNA2D4Q7Z3S7 1137 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 DSG4Q86SJ6 1040 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 ZNF598Q86UK7 904 aaKnown RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 TMEM151BQ8IW70 566 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 FBXW8Q8N3Y1 598 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 LINC00116Q8NCU8 138 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 OR6C4Q8NGE1 309 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 CCHCR1Q8TD31 782 aa7.49□□□□□ -1.21
FDFT1-213ENST00000528729 NOC3LQ8WTT2 800 aaKnown RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 TOE1Q96GM8 510 aaKnown RBP7.49□□□□□ -1.21
FDFT1-213ENST00000528729 HIST1H2AHQ96KK5 128 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms