RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SLC6A4P31645 630 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 CD70P32970 193 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 ACSL1P33121 698 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 ST8SIA6P61647 398 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 GCNT1Q02742 428 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 RING1Q06587 406 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 IL27RAQ6UWB1 636 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 KIAA0907Q7Z7F0 614 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 CREBRFQ8IUR6 639 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 NAXDQ8IW45 347 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 GATA6Q92908 595 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 AZIN2Q96A70 460 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 SRRTQ9BXP5 876 aaKnown RBP23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 IRX2Q9BZI1 471 aaPredicted RBP23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 FRYQ5TBA9 3013 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 NUMA1Q14980 2115 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 CAPN9O14815 690 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 CER1O95813 267 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 IGLV3-27P01718 113 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 MATKP42679 507 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 PTPRNQ16849 979 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 FAM133BQ5BKY9 247 aaKnown RBP23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 CARNMT1Q8N4J0 409 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 HJURPQ8NCD3 748 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 WFDC5Q8TCV5 224 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 GANCQ8TET4 914 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 SERPINB11Q96P15 392 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 BTBD1Q9H0C5 482 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 PCED1AQ9H1Q7 454 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 C6orf106Q9H6K1 298 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 FBRSQ9HAH7 460 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 UBE2TQ9NPD8 197 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 NAALADL1Q9UQQ1 740 aa23.24■■□□□ 1.31
TRAPPC4-208ENST00000527680 SART1O43290 800 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 MOCS2O96007 188 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 AFPP02771 609 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 BMP6P22004 513 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 ACADSBP45954 432 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 CSNK1EP49674 416 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 RPS14P62263 151 aaKnown RBP23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 ZBTB16Q05516 673 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 HLA-BQ31612 363 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 TTC31Q49AM3 519 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 FIBINQ8TAL6 211 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 ADAM32Q8TC27 787 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 TMEM121BQ9BXQ6 578 aaPredicted RBP23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 IL21RQ9HBE5 538 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 NCKAP1Q9Y2A7 1128 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 TLR6Q9Y2C9 796 aa23.23■■□□□ 1.31
TRAPPC4-208ENST00000527680 A0A1B0GVT2 93 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 MED7O43513 233 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 LETM1O95202 739 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 SEMA4FO95754 770 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 GPD2P43304 727 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 RPS24P62847 133 aaKnown RBP23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 PAK1Q13153 545 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 MORC3Q14149 939 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 NADSYN1Q6IA69 706 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 TRIM59Q8IWR1 403 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 CFAP52Q8N1V2 620 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 PNPLA1Q8N8W4 532 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 DQX1Q8TE96 717 aaKnown RBP23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 ZCCHC14Q8WYQ9 949 aaKnown RBP23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 FCRL2Q96LA5 508 aaPredicted RBP23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 KREMEN1Q96MU8 473 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 INTS2Q9H0H0 1204 aaKnown RBP23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 TM7SF3Q9NS93 570 aa23.22■■□□□ 1.31
TRAPPC4-208ENST00000527680 KNL1Q8NG31 2342 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 RNASEH1O60930 286 aaKnown RBP23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 FSBPO95073 299 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 FGFR1OPO95684 399 aaKnown RBP23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 FYNP06241 537 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 AFF3P51826 1226 aaKnown RBP23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 CDH18Q13634 790 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 TEAD4Q15561 434 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 ZNF776Q68DI1 518 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 DENND1BQ6P3S1 775 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 FOXR2Q6PJQ5 311 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 TRIM62Q9BVG3 475 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 MTG2Q9H4K7 406 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 RALYQ9UKM9 306 aaKnown RBP23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 APOBEC2Q9Y235 224 aaKnown RBP23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 CEP83Q9Y592 693 aa23.21■■□□□ 1.31
TRAPPC4-208ENST00000527680 FAM47DPA6NHR8 397 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 MOCS3O95396 460 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 APOEP02649 317 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 FTH1P19P0C7X4 201 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 USP8P40818 1118 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 CSKP41240 450 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 SYPL2Q5VXT5 272 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 RAB44Q7Z6P3 723 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 C1orf216Q8TAB5 229 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 TTC17Q96AE7 1141 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 NUCKS1Q9H1E3 243 aaKnown RBP23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 SGK2Q9HBY8 427 aa23.2■■□□□ 1.3
TRAPPC4-208ENST00000527680 THAP12O43422 761 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 ASLP04424 464 aa23.19■■□□□ 1.3
TRAPPC4-208ENST00000527680 BNC1Q01954 994 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms