RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 CROTQ9UKG9 612 aa7.31□□□□□ -1.24
VPS26B-204ENST00000527586 TPX2Q9ULW0 747 aaKnown RBP7.31□□□□□ -1.24
VPS26B-204ENST00000527586 SCML1Q9UN30 329 aa7.31□□□□□ -1.24
VPS26B-204ENST00000527586 PCDHA5Q9Y5H7 936 aa7.31□□□□□ -1.24
VPS26B-204ENST00000527586 KLF2Q9Y5W3 355 aaPredicted RBP7.31□□□□□ -1.24
VPS26B-204ENST00000527586 PKD1L1Q8TDX9 2849 aa7.31□□□□□ -1.24
VPS26B-204ENST00000527586 FLNAP21333 2647 aaKnown RBP7.31□□□□□ -1.24
VPS26B-204ENST00000527586 PRRC2AP48634 2157 aaKnown RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 CKAP5Q14008 2032 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 ZNF106Q9H2Y7 1883 aaKnown RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3DA0A087WVF3 549 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3IA0A087WXS9 549 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3EA0A087X179 549 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3KA0A087X1G2 549 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 A0A0B4J269 797 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TTC26A0AVF1 554 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3FA6NER0 549 aaPredicted RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 LACTBL1A8MY62 500 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3LB9A6J9 549 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 PIRO00625 290 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 MID1O15344 667 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TIMM44O43615 452 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 GREM1O60565 184 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 RAD1O60671 282 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3HP0C7X1 549 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TCN2P20062 427 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 PDCP20941 246 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 LIFRP42702 1097 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 MAGEA11P43364 429 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 PDE1AP54750 535 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 CCL7P80098 99 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 MC1RQ01726 317 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 FOXD4Q12950 439 aaPredicted RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 VWA2Q5GFL6 755 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 INTS6LQ5JSJ4 861 aaKnown RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 SPATA1Q5VX52 437 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3GQ6DHY5 549 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3CQ6IPX1 549 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 TBC1D3Q8IZP1 549 aaPredicted RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 ZNF548Q8NEK5 533 aaPredicted RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 CYB5D2Q8WUJ1 264 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 KIAA1143Q96AT1 154 aaPredicted RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 FUBP3Q96I24 572 aaKnown RBP eCLIP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 PIWIL1Q96J94 861 aaKnown RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 IFT74Q96LB3 600 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 HAPLN3Q96S86 360 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 PKMYT1Q99640 499 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 SMR3AQ99954 134 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 EIF2AK1Q9BQI3 630 aaKnown RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 ACBD6Q9BR61 282 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 MTA3Q9BTC8 594 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 CHMP4BQ9H444 224 aaKnown RBP7.3□□□□□ -1.24
VPS26B-204ENST00000527586 POLD4Q9HCU8 107 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 CHST11Q9NPF2 352 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 DNAJC28Q9NX36 388 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 RP1P56715 2156 aa7.3□□□□□ -1.24
VPS26B-204ENST00000527586 POLEQ07864 2286 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 F9P00740 461 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 ITGB3P05106 788 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 RPLP0P05388 317 aaKnown RBP7.29□□□□□ -1.24
VPS26B-204ENST00000527586 ANXA13P27216 316 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 TAF6P49848 677 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 ARSDP51689 593 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 ADPRHP54922 357 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 HNRNPKP61978 463 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS26B-204ENST00000527586 PPP2R3AQ06190 1150 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 EHHADHQ08426 723 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 IFRD2Q12894 506 aaPredicted RBP7.29□□□□□ -1.24
VPS26B-204ENST00000527586 RTN1Q16799 776 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 MIIPQ5JXC2 388 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 HECTD3Q5T447 861 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 TDRD10Q5VZ19 366 aaKnown RBP7.29□□□□□ -1.24
VPS26B-204ENST00000527586 MOXD1Q6UVY6 613 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 SYNE3Q6ZMZ3 975 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 ZNF438Q7Z4V0 828 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 BIVMQ86UB2 503 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 SLC35F3Q8IY50 421 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 SLFN12Q8IYM2 578 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 NXPE1Q8N323 547 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 Q8NA96 180 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 OR6B3Q8NGW1 331 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 STARD8Q92502 1023 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 GLMNQ92990 594 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 ARSGQ96EG1 525 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 HSD17B14Q9BPX1 270 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 EFHD1Q9BUP0 239 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 CALN1Q9BXU9 219 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 RSPH9Q9H1X1 276 aaPredicted RBP7.29□□□□□ -1.24
VPS26B-204ENST00000527586 CCSER2Q9H7U1 834 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 KCNMB3Q9NPA1 279 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS26B-204ENST00000527586 DDX43Q9NXZ2 648 aaKnown RBP7.29□□□□□ -1.24
VPS26B-204ENST00000527586 FZD4Q9ULV1 537 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 PADI4Q9UM07 663 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 PLA2G4CQ9UP65 541 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 DMTF1Q9Y222 760 aa7.29□□□□□ -1.24
VPS26B-204ENST00000527586 OAS3Q9Y6K5 1087 aaKnown RBP7.29□□□□□ -1.24
VPS26B-204ENST00000527586 LOC101059948A0A1B0GTJ6 334 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 A0A1W2PQM1 296 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 RNF212BA8MTL3 300 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms