RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 SMYD3Q9H7B4 428 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 PNPLA8Q9NP80 782 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 NGRNQ9NPE2 291 aaKnown RBP4.03□□□□□ -1.76
C11orf54-204ENST00000527003 METTL5Q9NRN9 209 aaKnown RBP4.03□□□□□ -1.76
C11orf54-204ENST00000527003 CHST7Q9NS84 486 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 DDX43Q9NXZ2 648 aaKnown RBP4.03□□□□□ -1.76
C11orf54-204ENST00000527003 EHD2Q9NZN4 543 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 ARHGAP20Q9P2F6 1191 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 WDR35Q9P2L0 1181 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 DPP7Q9UHL4 492 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 MSRAQ9UJ68 235 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 NOCTQ9UK39 431 aaKnown RBP4.03□□□□□ -1.76
C11orf54-204ENST00000527003 STRIP2Q9ULQ0 834 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 L1RE1Q9UN81 338 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 ZKSCAN5Q9Y2L8 839 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 PRG3Q9Y2Y8 225 aaPredicted RBP4.03□□□□□ -1.76
C11orf54-204ENST00000527003 PCDHA13Q9Y5I0 950 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 MRPL42Q9Y6G3 142 aaKnown RBP4.03□□□□□ -1.76
C11orf54-204ENST00000527003 TTC3P53804 2025 aa4.03□□□□□ -1.76
C11orf54-204ENST00000527003 A0A087X0T9 212 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 A0A0A6YYK5 440 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 BTNL10A8MVZ5 291 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 H0YGN5 161 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 O00370 1275 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 DDX3XO00571 662 aaKnown RBP eCLIP4.02□□□□□ -1.779e-8■■■□□ 15.2
C11orf54-204ENST00000527003 TNFRSF10CO14798 259 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PJA2O43164 708 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SUV39H1O43463 412 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 KRT86O43790 486 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 TBC1D4O60343 1298 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 CLEC3AO75596 197 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 FGF18O76093 207 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 FBXO21O94952 628 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PRAMEF1O95521 474 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 EFEMP2O95967 443 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 FTLP02792 175 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 CYP1A1P04798 512 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PDGFRBP09619 1106 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 FAM228BP0C875 321 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 FAM200BP0CF97 657 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 UNGP13051 313 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 DESP17661 470 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 LMO2P25791 158 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 TKTP29401 623 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 MAGEA1P43355 309 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 MAGEA11P43364 429 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 BRCC3P46736 316 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 TUFMP49411 452 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 GLUD2P49448 558 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 GATMP50440 423 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 GALK1P51570 392 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 VAV2P52735 878 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 GPC5P78333 572 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 FMO1Q01740 532 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 TAP1Q03518 808 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 BST2Q10589 180 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 GPR17Q13304 367 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SSPNQ14714 243 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 TCEAL1Q15170 157 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SHHQ15465 462 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 CFAP221Q4G0U5 840 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PAN2Q504Q3 1202 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 ARHGAP29Q52LW3 1261 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 CCDC122Q5T0U0 273 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SLC8B1Q6J4K2 584 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 ACAD10Q6JQN1 1059 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 VSTM1Q6UX27 236 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SCARA5Q6ZMJ2 495 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 KIAA1328Q86T90 577 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 ACOT1Q86TX2 421 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 NOP9Q86U38 636 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 ERICH1Q86X53 443 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 CEP57Q86XR8 500 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PHF13Q86YI8 300 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SPATA2LQ8IUW3 424 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 RHOT2Q8IXI1 618 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 RNF168Q8IYW5 571 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 CCAR2Q8N163 923 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 C1orf131Q8NDD1 294 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PDZD8Q8NEN9 1154 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 KIAA1524Q8TCG1 905 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SPPL2BQ8TCT7 592 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 IPO4Q8TEX9 1081 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 KBTBD7Q8WVZ9 684 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 CTNNBL1Q8WYA6 563 aaPredicted RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 KCTD13Q8WZ19 329 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 DDX1Q92499 740 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 RNF34Q969K3 372 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SMARCD1Q96GM5 515 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 TGS1Q96RS0 853 aaKnown RBP4.02□□□□□ -1.77
C11orf54-204ENST00000527003 CHP1Q99653 195 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 NCAPGQ9BPX3 1015 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 SYT15Q9BQS2 421 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PAAF1Q9BRP4 392 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 G6PC3Q9BUM1 346 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 HERC2P3Q9BVR0 1158 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 DUSP16Q9BY84 665 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 FOXP3Q9BZS1 431 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 ELOVL4Q9GZR5 314 aa4.02□□□□□ -1.77
C11orf54-204ENST00000527003 PRDM14Q9GZV8 571 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms