RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 S100A2P29034 98 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 NSUN2Q08J23 767 aaKnown RBP eCLIP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ANKS6Q68DC2 871 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 EIF1ADQ8N9N8 165 aaKnown RBP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ACMSDQ8TDX5 336 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 DLG3Q92796 817 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 FAM129BQ96TA1 746 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 CLK4Q9HAZ1 481 aaKnown RBP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 NFKBIL1Q9UBC1 381 aaPredicted RBP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 RAPGEFL1Q9UHV5 662 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 FAM95CA0A1B0GW59 222 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 TBX3O15119 743 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 PSIP1O75475 530 aaKnown RBP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 DGAT1O75907 488 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 TMEM253P0C7T8 217 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ATP6V1B2P21281 511 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 PRKCEQ02156 737 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 USP49Q70CQ1 688 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 KYQ8NBH2 561 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ZHX1-C8orf76Q96EF9 292 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 CDH19Q9H159 772 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 COMTP21964 271 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ACLYP53396 1101 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 MAPK12P53778 367 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 NRF1Q16656 503 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 MAP1SQ66K74 1059 aaPredicted RBP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ANKRD23Q86SG2 305 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 KRT78Q8N1N4 520 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 SFRP1Q8N474 314 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 COMMD9Q9P000 198 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 XPO7Q9UIA9 1087 aaKnown RBP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 MYCLP1P12525 358 aaPredicted RBP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 F8A1P23610 371 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 EMC2Q15006 297 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 DDR2Q16832 855 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 SPDYE7PQ495Y7 208 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 GALNT18Q6P9A2 607 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ELMOD1Q8N336 334 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ZNF75CPQ92670 426 aaPredicted RBP12.63□□□□□ -0.39
FGFR1-227ENST00000526570 TIPINQ9BVW5 301 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 UBE2QL1A1L167 161 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 E5RI56 91 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 H3BNX3 289 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ASLP04424 464 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 PRKAR1AP10644 381 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ROR1Q01973 937 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 TTC30BQ8N4P2 665 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 BDH2Q9BUT1 245 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 TLR10Q9BXR5 811 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 LRRC4BQ9NT99 713 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 LMCD1Q9NZU5 365 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 ALG6Q9Y672 507 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 SQORQ9Y6N5 450 aa12.63□□□□□ -0.39
FGFR1-227ENST00000526570 M0QYV0 167 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 GUCA1CO95843 209 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 ITGA4P13612 1032 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 VEGFAP15692 232 aaPredicted RBP12.62□□□□□ -0.39
FGFR1-227ENST00000526570 MSH3P20585 1137 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 ADORA2BP29275 332 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 ADSSP30520 456 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 DGCR6Q14129 220 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 RWDD4Q6NW29 188 aaKnown RBP12.62□□□□□ -0.39
FGFR1-227ENST00000526570 SAPCD2Q86UD0 394 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 REEP2Q9BRK0 252 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 SEMA6AQ9H2E6 1030 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 KCNH7Q9NS40 1196 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 HPSEQ9Y251 543 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 HAT1O14929 419 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 FDPSP14324 419 aaKnown RBP12.62□□□□□ -0.39
FGFR1-227ENST00000526570 UCHL3P15374 230 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 RPA1P27694 616 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 AMPD2Q01433 879 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 SLCO6A1Q86UG4 719 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 FBXW8Q8N3Y1 598 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 MTMR8Q96EF0 704 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 L3MBTL3Q96JM7 780 aaPredicted RBP12.62□□□□□ -0.39
FGFR1-227ENST00000526570 CINPQ9BW66 212 aaPredicted RBP12.62□□□□□ -0.39
FGFR1-227ENST00000526570 DCLK3Q9C098 648 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 NGRNQ9NPE2 291 aaKnown RBP12.62□□□□□ -0.39
FGFR1-227ENST00000526570 PCSK1NQ9UHG2 260 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 AP4B1Q9Y6B7 739 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 HEATR9A2RTY3 570 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 PTENP60484 403 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 DLG1Q12959 904 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 ABRAXAS1Q6UWZ7 409 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 SLC6A15Q9H2J7 730 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 OGDHLQ9ULD0 1010 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 RGL2O15211 777 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 CENPCQ03188 943 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 IL18R1Q13478 541 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 PLET1Q6UQ28 207 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 SCFD2Q8WU76 684 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 GSDMCQ9BYG8 508 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 STOX2Q9P2F5 926 aaPredicted RBP12.62□□□□□ -0.39
FGFR1-227ENST00000526570 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 EMSYQ7Z589 1322 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
FGFR1-227ENST00000526570 ADM5C9JUS6 153 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms