RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CHD1LQ86WJ1 897 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 IZUMO1Q8IYV9 350 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 FSTL5Q8N475 847 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-211ENST00000525970 NGEFQ8N5V2 710 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 PTGR2Q8N8N7 351 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-211ENST00000525970 C11orf44Q8N8P7 122 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 FAM71DQ8N9W8 422 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 FAM98AQ8NCA5 519 aaKnown RBP5.04□□□□□ -1.6
CSDE1-211ENST00000525970 LSM14AQ8ND56 463 aaKnown RBP5.04□□□□□ -1.6
CSDE1-211ENST00000525970 LINS1Q8NG48 757 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 CAGE1Q8TC20 777 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 OSCP1Q8WVF1 389 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 OVCA2Q8WZ82 227 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 LPIN2Q92539 896 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 TPSD1Q9BZJ3 242 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 CCDC134Q9H6E4 229 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 RMI1Q9H9A7 625 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 NKIRAS2Q9NYR9 191 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 NAALADL1Q9UQQ1 740 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 DRG1Q9Y295 367 aaKnown RBP5.04□□□□□ -1.6
CSDE1-211ENST00000525970 PCDHB7Q9Y5E2 793 aa5.04□□□□□ -1.6
CSDE1-211ENST00000525970 SALL3Q9BXA9 1300 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 SEPT4O43236 478 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 AHCYL1O43865 530 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 PLOD3O60568 738 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 URI1O94763 535 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-211ENST00000525970 MLYCDO95822 493 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 PPP3CBP16298 524 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 MAPK4P31152 587 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 HOXD13P35453 343 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 FOLR3P41439 243 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 RBM6P78332 1123 aaKnown RBP5.03□□□□□ -1.6
CSDE1-211ENST00000525970 GPR68Q15743 365 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 CCNG2Q16589 344 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 DEPDC1Q5TB30 811 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 LIPMQ5VYY2 423 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 KAZNQ674X7 775 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 GRHL2Q6ISB3 625 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 VWA1Q6PCB0 445 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 B4GALNT4Q76KP1 1039 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 DTX2Q86UW9 622 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 BOLLQ8N9W6 283 aaKnown RBP5.03□□□□□ -1.6
CSDE1-211ENST00000525970 FSIP1Q8NA03 581 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 ATRIPQ8WXE1 791 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 NPIPB3Q92617 1050 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 FAM136AQ96C01 138 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 RSPRY1Q96DX4 576 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 WDYHV1Q96HA8 205 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 APOPT1Q96IL0 206 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 NPAS1Q99742 590 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 NUDT16L1Q9BRJ7 211 aaKnown RBP5.03□□□□□ -1.6
CSDE1-211ENST00000525970 SDF4Q9BRK5 362 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 USP44Q9H0E7 712 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 PLSCR4Q9NRQ2 329 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 ZDHHC7Q9NXF8 308 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 TBC1D14Q9P2M4 693 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 STEAP1Q9UHE8 339 aa5.03□□□□□ -1.6
CSDE1-211ENST00000525970 KDM3AQ9Y4C1 1321 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 A8MVJ9 347 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 NKX2-8O15522 239 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 DHX16O60231 1041 aaKnown RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 SCGB1D1O95968 90 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 CHRM2P08172 466 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 CPA1P15085 419 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 CD19P15391 556 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 CHN1P15882 459 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 EPHA8P29322 1005 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 PGM1P36871 562 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 PNPLA4P41247 253 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 RPL15P61313 204 aaKnown RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 ITIH3Q06033 890 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 PTP4A2Q12974 167 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 LRRC24Q50LG9 513 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 DENND1BQ6P3S1 775 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 FAM9BQ8IZU0 186 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.02□□□□□ -1.613e-12■□□□□ 9.4
CSDE1-211ENST00000525970 MYCBPAPQ8TBZ2 947 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 ACTRT2Q8TDY3 377 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 SOCS4Q8WXH5 440 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 TFAP2BQ92481 460 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 CTHRC1Q96CG8 243 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 REXO5Q96IC2 774 aaKnown RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 PGBD1Q96JS3 809 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 PPP1R10Q96QC0 940 aaKnown RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 TAOK3Q9H2K8 898 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 SLC25A10Q9UBX3 287 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 TBC1D29Q9UFV1 150 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 UBE2J1Q9Y385 318 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 RSF1Q96T23 1441 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-211ENST00000525970 RUSC2Q8N2Y8 1516 aa5.02□□□□□ -1.61
CSDE1-211ENST00000525970 FAM90A7PA6NKC0 464 aa5.01□□□□□ -1.61
CSDE1-211ENST00000525970 FAM90A22PA8MWA6 464 aa5.01□□□□□ -1.61
CSDE1-211ENST00000525970 FAM90A12PA8MX19 464 aa5.01□□□□□ -1.61
CSDE1-211ENST00000525970 FAM90A23PA8MXZ1 464 aa5.01□□□□□ -1.61
CSDE1-211ENST00000525970 CCER2I3L3R5 266 aa5.01□□□□□ -1.61
CSDE1-211ENST00000525970 HNRNPRO43390 633 aaKnown RBP5.01□□□□□ -1.61
CSDE1-211ENST00000525970 TULP3O75386 442 aa5.01□□□□□ -1.61
CSDE1-211ENST00000525970 VNN1O95497 513 aa5.01□□□□□ -1.61
CSDE1-211ENST00000525970 CLEC3BP05452 202 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms