RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 CNGB3Q9NQW8 809 aa11.13□□□□□ -0.63
VPS26B-203ENST00000525918 DKK4Q9UBT3 224 aa11.13□□□□□ -0.63
VPS26B-203ENST00000525918 ANKRD6Q9Y2G4 727 aa11.13□□□□□ -0.63
VPS26B-203ENST00000525918 SNX11Q9Y5W9 270 aa11.13□□□□□ -0.63
VPS26B-203ENST00000525918 SLCO1B1Q9Y6L6 691 aa11.13□□□□□ -0.63
VPS26B-203ENST00000525918 NYNRINQ9P2P1 1898 aaKnown RBP11.12□□□□□ -0.63
VPS26B-203ENST00000525918 IRAK2O43187 625 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 TNFSF14O43557 240 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 PCDHGA12O60330 932 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 DFNA5O60443 496 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 FSBPO95073 299 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 LCP1P13796 627 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 CD27P26842 260 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 GRK6P43250 576 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 SLC11A2P49281 568 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 CLCN6P51797 869 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 DAOAP59103 153 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 TTC31Q49AM3 519 aaPredicted RBP11.12□□□□□ -0.63
VPS26B-203ENST00000525918 DCAF17Q5H9S7 520 aaPredicted RBP11.12□□□□□ -0.63
VPS26B-203ENST00000525918 PIK3R6Q5UE93 754 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 NUGGCQ68CJ6 796 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 SMYD4Q8IYR2 804 aaPredicted RBP11.12□□□□□ -0.63
VPS26B-203ENST00000525918 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 UBA3Q8TBC4 463 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 AZIN2Q96A70 460 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
VPS26B-203ENST00000525918 SCML1Q9UN30 329 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 NCKAP1Q9Y2A7 1128 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 BTBD3Q9Y2F9 522 aa11.12□□□□□ -0.63
VPS26B-203ENST00000525918 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
VPS26B-203ENST00000525918 COL5A1P20908 1838 aaPredicted RBP11.12□□□□□ -0.63
VPS26B-203ENST00000525918 GOLGA8CPA6NN73 597 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 O00370 1275 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 SLC16A3O15427 465 aaKnown RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 MSI1O43347 362 aaKnown RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 TBL1XO60907 577 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 IGLV3-27P01718 113 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 TBXAS1P24557 533 aaPredicted RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 CD70P32970 193 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 PRCPP42785 496 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 SGSHP51688 502 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 ST8SIA6P61647 398 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 SFSWAPQ12872 951 aaKnown RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 COL28A1Q2UY09 1125 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 PKDCCQ504Y2 493 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 ZNF776Q68DI1 518 aaPredicted RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 MSANTD2Q6P1R3 559 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 RFWD3Q6PCD5 774 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 LCLAT1Q6UWP7 414 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 USP30Q70CQ3 517 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 ADAT2Q7Z6V5 191 aaKnown RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 PDZD3Q86UT5 571 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 MFN1Q8IWA4 741 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 ZC3H3Q8IXZ2 948 aaKnown RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 FIBINQ8TAL6 211 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 WFDC5Q8TCV5 224 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 SLC35F5Q8WV83 523 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 IRGQQ8WZA9 623 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 TSG101Q99816 390 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 RSPH9Q9H1X1 276 aaPredicted RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 GOLPH3LQ9H4A5 285 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 RMND1Q9NWS8 449 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 ZDHHC9Q9Y397 364 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 ATP6V1DQ9Y5K8 247 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 CELSR3Q9NYQ7 3312 aa11.11□□□□□ -0.63
VPS26B-203ENST00000525918 GOLGA4Q13439 2230 aaKnown RBP11.11□□□□□ -0.63
VPS26B-203ENST00000525918 ACACAQ13085 2346 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 GOLGA6L7A0A1B0GV03 622 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 TYW5A2RUC4 315 aaKnown RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 H0Y8X5 98 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 KCNK3O14649 394 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 PAPSS1O43252 624 aaPredicted RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 ACSL4O60488 711 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 RNASEH1O60930 286 aaKnown RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 ASLP04424 464 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 PAEPP09466 180 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 SLC6A4P31645 630 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 CTSKP43235 329 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 CCT8P50990 548 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 RACK1P63244 317 aaKnown RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 INAVAQ3KP66 663 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 COBLL1Q53SF7 1204 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 FAM133BQ5BKY9 247 aaKnown RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 PMF1Q6P1K2 205 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 UBR7Q8N806 425 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 KDM1BQ8NB78 822 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 HNRNPLLQ8WVV9 542 aaKnown RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 SLC35C1Q96A29 364 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 TTC17Q96AE7 1141 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 SKA1Q96BD8 255 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 DDX50Q9BQ39 737 aaKnown RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 ORAI3Q9BRQ5 295 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 ACE2Q9BYF1 805 aaPredicted RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 ARMCX3Q9UH62 379 aaPredicted RBP11.1□□□□□ -0.63
VPS26B-203ENST00000525918 RAXQ9Y2V3 346 aa11.1□□□□□ -0.63
VPS26B-203ENST00000525918 URB1O60287 2271 aaKnown RBP11.09□□□□□ -0.63
VPS26B-203ENST00000525918 A0A1W2PPC4 97 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms