RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 ADGRF3Q8IZF5 1079 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 MMP21Q8N119 569 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 EME1Q96AY2 570 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 CAMK1GQ96NX5 476 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 TRIM2Q9C040 744 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 OBP2BQ9NPH6 170 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 SEMA4BQ9NPR2 832 aaPredicted RBP4.56□□□□□ -1.68
CD44-217ENST00000525348 PAPOLBQ9NRJ5 636 aaKnown RBP4.56□□□□□ -1.68
CD44-217ENST00000525348 RAB21Q9UL25 225 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 F8W810 466 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 KCNAB3O43448 404 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 ATG13O75143 517 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 SGPL1O95470 568 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 IGFBP2P18065 325 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 AKT1P31749 480 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 TECP42680 631 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 ALDH18A1P54886 795 aaKnown RBP4.55□□□□□ -1.68
CD44-217ENST00000525348 FOXG1P55316 489 aaPredicted RBP4.55□□□□□ -1.68
CD44-217ENST00000525348 STARD3Q14849 445 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 BTBD16Q32M84 506 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 KIAA1755Q5JYT7 1200 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 LIPMQ5VYY2 423 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 RINT1Q6NUQ1 792 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 WDR93Q6P2C0 686 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 SLC39A5Q6ZMH5 540 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 CCDC146Q8IYE0 955 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 OR52N4Q8NGI2 321 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 FAR2Q96K12 515 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 WACQ9BTA9 647 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 ABHD14AQ9BUJ0 271 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 TP63Q9H3D4 680 aaPredicted RBP4.55□□□□□ -1.68
CD44-217ENST00000525348 PRDM16Q9HAZ2 1276 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 POT1Q9NUX5 634 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 AGO2Q9UKV8 859 aaKnown RBP4.55□□□□□ -1.68
CD44-217ENST00000525348 TRPC5Q9UL62 973 aaPredicted RBP4.55□□□□□ -1.68
CD44-217ENST00000525348 COG5Q9UP83 839 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 ZBTB1Q9Y2K1 713 aa4.55□□□□□ -1.68
CD44-217ENST00000525348 A0A087WV62 115 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 FAM90A18PA6NE21 464 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 FAM90A16PA6NEW6 464 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 FAM90A9PA6NNJ1 464 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 LGALS16A8MUM7 142 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 FAM90A5PA8MXJ8 464 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 EPN2O95208 641 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 IFIT2P09913 472 aaKnown RBP4.54□□□□□ -1.68
CD44-217ENST00000525348 FAM90A15PP0C7V4 464 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 FAM90A14PP0C7W9 464 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 GYS1P13807 737 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 ITGB6P18564 788 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 GALNT1Q10472 559 aaPredicted RBP4.54□□□□□ -1.68
CD44-217ENST00000525348 MAPK7Q13164 816 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 FHL1Q13642 323 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 SPARCL1Q14515 664 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 SMTNL2Q2TAL5 461 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 GLE1Q53GS7 698 aaKnown RBP4.54□□□□□ -1.68
CD44-217ENST00000525348 NUGGCQ68CJ6 796 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 GGT6Q6P531 493 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 COLCA1Q6ZS62 124 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 TOGARAM2Q6ZUX3 1019 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 MORC1Q86VD1 984 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 FAM71BQ8TC56 605 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 CLEC4CQ8WTT0 213 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 KAT2AQ92830 837 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 KAT2BQ92831 832 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 PMM1Q92871 262 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 SLC39A13Q96H72 371 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 TUBB6Q9BUF5 446 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 WDR12Q9GZL7 423 aaKnown RBP4.54□□□□□ -1.68
CD44-217ENST00000525348 AAMDCQ9H7C9 122 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 IL21RQ9HBE5 538 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 ERVK-5Q9HDB9 667 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 THSD1Q9NS62 852 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.54□□□□□ -1.68
CD44-217ENST00000525348 UTS2RQ9UKP6 389 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 PCDHA12Q9UN75 941 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 LZTS1Q9Y250 596 aa4.54□□□□□ -1.68
CD44-217ENST00000525348 KIR2DS5A0A0G2JLQ3 304 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 GOLGA6L3A6NEY3 463 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 A6NNC1 897 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 SLC38A8A6NNN8 435 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 KIR2DS3K7RE56 304 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 TRIM38O00635 465 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 USP12O75317 370 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 TULP3O75386 442 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 NDUFB8O95169 186 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 CYP3A4P08684 503 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 ALDOCP09972 364 aaKnown RBP4.53□□□□□ -1.68
CD44-217ENST00000525348 TGM2P21980 687 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 PDIA3P30101 505 aaKnown RBP4.53□□□□□ -1.68
CD44-217ENST00000525348 TLE3Q04726 772 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 BTKQ06187 659 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 RTL10Q7L3V2 364 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 NRSN1Q8IZ57 195 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 PELI3Q8N2H9 469 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 PAQR4Q8N4S7 273 aaPredicted RBP4.53□□□□□ -1.68
CD44-217ENST00000525348 SLC44A5Q8NCS7 719 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 ATP2A3Q93084 1043 aa4.53□□□□□ -1.68
CD44-217ENST00000525348 REXO5Q96IC2 774 aaKnown RBP4.53□□□□□ -1.68
CD44-217ENST00000525348 OSBPL5Q9H0X9 879 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms