RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 GSC2O15499 205 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 CCDC22O60826 627 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ENTPD5O75356 428 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 PSMG1O95456 288 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ASS1P00966 412 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 EDN1P05305 212 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 DLDP09622 509 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 KRT4P19013 534 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 PHBP35232 272 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 RPL22P35268 128 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 TFDP1Q14186 410 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 KHDC1Q4VXA5 237 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ACSBG2Q5FVE4 666 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 OR52E8Q6IFG1 317 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 TMEM270Q6UE05 265 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 DSTYKQ6XUX3 929 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 RINLQ6ZS11 566 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 GSTA5Q7RTV2 222 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 NPAS4Q8IUM7 802 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 MFN1Q8IWA4 741 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 BRSK2Q8IWQ3 736 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ZBED8Q8IZ13 594 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ARFGAP1Q8N6T3 406 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 CEP120Q8N960 986 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 FNIP1Q8TF40 1166 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 SLC44A1Q8WWI5 657 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF606Q8WXB4 792 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 NSL1Q96IY1 281 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 SYT15Q9BQS2 421 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF518BQ9C0D4 1074 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 NSUN3Q9H649 340 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ALG13Q9NP73 1137 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 NRBP2Q9NSY0 501 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 DDX43Q9NXZ2 648 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 STX18Q9P2W9 335 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 AGO2Q9UKV8 859 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 LRFN2Q9ULH4 789 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 PLA2G4CQ9UP65 541 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 ZNF148Q9UQR1 794 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 MTO1Q9Y2Z2 717 aaKnown RBP8.09□□□□□ -1.11
SPIDR-223ENST00000524033 TTLL3Q9Y4R7 772 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 PCDHB7Q9Y5E2 793 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 WDFY4Q6ZS81 3184 aa8.09□□□□□ -1.11
SPIDR-223ENST00000524033 TCRBV7S3A2A0A539 114 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CAPN14A8MX76 684 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 F8VP50 259 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 FAM189A1O60320 539 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 MAGEC1O60732 1142 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 KRT36O76013 467 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ENDOD1O94919 500 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ATP5BP06576 529 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 LINC00271P0C7V0 271 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ATF7P17544 494 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 SSTR1P30872 391 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ARL2P36404 184 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 MAGEA6P43360 314 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 NAMPTP43490 491 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 LIG4P49917 911 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CRYBB1P53674 252 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 OTUD4Q01804 1114 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 PRKCEQ02156 737 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 SLC34A1Q06495 639 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 KLC1Q07866 573 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 AP1B1Q10567 949 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 KCNJ11Q14654 390 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 KPNB1Q14974 876 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 KIZQ2M2Z5 673 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 HSF5Q4G112 596 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 PAN2Q504Q3 1202 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 TBCELQ5QJ74 424 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ZBTB41Q5SVQ8 909 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 KAZNQ674X7 775 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CWF19L1Q69YN2 538 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 DNAJC24Q6P3W2 148 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 LRRC74BQ6ZQY2 392 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 SLC24A5Q71RS6 500 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 MTDHQ86UE4 582 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 KBTBD2Q8IY47 623 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CMTR2Q8IYT2 770 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 GJD3Q8N144 294 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 WDTC1Q8N5D0 677 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 FBXO36Q8NEA4 188 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 OR5B17Q8NGF7 314 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ACTL9Q8TC94 416 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 LINC01599Q8WXQ3 324 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 GATA6Q92908 595 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 PABPC5Q96DU9 382 aaKnown RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 SERAC1Q96JX3 654 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CEP170P1Q96L14 293 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 MCEEQ96PE7 176 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 TRAPPC9Q96Q05 1148 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 FNBP1Q96RU3 617 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 INSM2Q96T92 566 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-223ENST00000524033 ADAM2Q99965 735 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 TMEM121Q9BTD3 319 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 CCDC28BQ9BUN5 200 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 TSSK1BQ9BXA7 367 aa8.08□□□□□ -1.12
SPIDR-223ENST00000524033 TMEM120AQ9BXJ8 343 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms