RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 SULT1E1P49888 294 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 CCNHP51946 323 aaPredicted RBP18.38■□□□□ 0.53
IKBKB-228ENST00000523517 PDE1BQ01064 536 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 ALKAL1Q6UXT8 129 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 CATSPER4Q7RTX7 472 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 PSTKQ8IV42 348 aaKnown RBP18.38■□□□□ 0.53
IKBKB-228ENST00000523517 APLFQ8IW19 511 aaPredicted RBP18.38■□□□□ 0.53
IKBKB-228ENST00000523517 KBTBD2Q8IY47 623 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 CEP41Q9BYV8 373 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 ADAMTS10Q9H324 1103 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 ADARB2Q9NS39 739 aaKnown RBP18.38■□□□□ 0.53
IKBKB-228ENST00000523517 SYBUQ9NX95 663 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 SOX13Q9UN79 622 aa18.38■□□□□ 0.53
IKBKB-228ENST00000523517 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 ZSWIM8A7E2V4 1837 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 KLHL2O95198 593 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 PROCP04070 461 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 PSMB4P28070 264 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 GLUD2P49448 558 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 TMEM62Q0P6H9 643 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 INSCQ1MX18 579 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 FBXO47Q5MNV8 452 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 C1orf146Q5VVC0 180 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 C10orf107Q8IVU9 208 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 OPTNQ96CV9 577 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 ZNF184Q99676 751 aaPredicted RBP18.37■□□□□ 0.53
IKBKB-228ENST00000523517 FERMT1Q9BQL6 677 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 YIPF3Q9GZM5 350 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 SNX25Q9H3E2 840 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 SEPT10Q9P0V9 454 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 APOBEC2Q9Y235 224 aaKnown RBP18.37■□□□□ 0.53
IKBKB-228ENST00000523517 MEI4A8MW99 385 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 PIRO00625 290 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 SPTLC1O15269 473 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 DDNO94850 711 aaPredicted RBP18.37■□□□□ 0.53
IKBKB-228ENST00000523517 GRK2P25098 689 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 PDK1Q15118 436 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 PPM1JQ5JR12 505 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 RASSF3Q86WH2 238 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 RNF139Q8WU17 664 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 NDRG1Q92597 394 aaKnown RBP18.37■□□□□ 0.53
IKBKB-228ENST00000523517 VCXQ9H320 206 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 GPAMQ9HCL2 828 aa18.37■□□□□ 0.53
IKBKB-228ENST00000523517 UBQLN1Q9UMX0 589 aaKnown RBP18.37■□□□□ 0.53
IKBKB-228ENST00000523517 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.36■□□□□ 0.53
IKBKB-228ENST00000523517 KPNA7A9QM74 516 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 RECQL4O94761 1208 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 SP100P23497 879 aaPredicted RBP18.36■□□□□ 0.53
IKBKB-228ENST00000523517 AP2B1P63010 937 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 TTLL12Q14166 644 aaPredicted RBP18.36■□□□□ 0.53
IKBKB-228ENST00000523517 ZNF618Q5T7W0 954 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 MAVSQ7Z434 540 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 CCNYQ8ND76 341 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 PPP4R1Q8TF05 950 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 FAM149B1Q96BN6 582 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 PGBD4Q96DM1 585 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 SORT1Q99523 831 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 NXF3Q9H4D5 531 aaKnown RBP18.36■□□□□ 0.53
IKBKB-228ENST00000523517 TMPRSS4Q9NRS4 437 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 DLGAP2Q9P1A6 1054 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 TXNDC16Q9P2K2 825 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 DNAJB4Q9UDY4 337 aa18.36■□□□□ 0.53
IKBKB-228ENST00000523517 A0A088AWK7 358 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 ERVK-10P10266 1014 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 SMAD1Q15797 465 aaKnown RBP18.35■□□□□ 0.53
IKBKB-228ENST00000523517 OTUD1Q5VV17 481 aaPredicted RBP18.35■□□□□ 0.53
IKBKB-228ENST00000523517 NOTUMQ6P988 496 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 ATG14Q6ZNE5 492 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 ZNF567Q8N184 647 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 FAM49AQ9H0Q0 323 aaPredicted RBP18.35■□□□□ 0.53
IKBKB-228ENST00000523517 PNPOQ9NVS9 261 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 DNAJC28Q9NX36 388 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 TMEM216Q9P0N5 145 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 OTOFQ9HC10 1997 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 POLBP06746 335 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 AKAP5P24588 427 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 TKTP29401 623 aaKnown RBP18.35■□□□□ 0.53
IKBKB-228ENST00000523517 TYK2P29597 1187 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 GP5P40197 560 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 MLH1P40692 756 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 IDH3AP50213 366 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 ERFP50548 548 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 PITX1P78337 314 aaPredicted RBP18.35■□□□□ 0.53
IKBKB-228ENST00000523517 DCAF6Q58WW2 860 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 CES3Q6UWW8 571 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 PIGZQ86VD9 579 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 KATNBL1Q9H079 304 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 PRDM12Q9H4Q4 367 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 FAM96AQ9H5X1 160 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 CDHR5Q9HBB8 845 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 SETD4Q9NVD3 440 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 GDAP2Q9NXN4 497 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.35■□□□□ 0.53
IKBKB-228ENST00000523517 IL1RAPL1Q9NZN1 696 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 COPG2Q9UBF2 871 aa18.35■□□□□ 0.53
IKBKB-228ENST00000523517 XPO1O14980 1071 aaKnown RBP18.34■□□□□ 0.53
IKBKB-228ENST00000523517 MCM3APO60318 1980 aa18.34■□□□□ 0.53
IKBKB-228ENST00000523517 SIN3BO75182 1162 aa18.34■□□□□ 0.53
IKBKB-228ENST00000523517 SF3B1O75533 1304 aaKnown RBP eCLIP18.34■□□□□ 0.534e-6■■■■■ 108.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms