RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 MTA1Q13330 715 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 STX1AQ16623 288 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 MS4A13Q5J8X5 152 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 WDR45BQ5MNZ6 344 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 SYPL2Q5VXT5 272 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 MBLAC2Q68D91 279 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 NADSYN1Q6IA69 706 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 TAC4Q86UU9 113 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 ADIPOR2Q86V24 386 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 PASD1Q8IV76 773 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 RGL4Q8IZJ4 473 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 DEFB119Q8N690 84 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 ATP6V0D2Q8N8Y2 350 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 FIBINQ8TAL6 211 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 ADAM32Q8TC27 787 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 SORCS1Q8WY21 1168 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 ANP32BQ92688 251 aaKnown RBP11.3□□□□□ -0.6
PVT1-216ENST00000523068 ZNF419Q96HQ0 510 aaPredicted RBP11.3□□□□□ -0.6
PVT1-216ENST00000523068 BTN2A3PQ96KV6 586 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 HSPA12BQ96MM6 686 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 MKRN2Q9H000 416 aaKnown RBP11.3□□□□□ -0.6
PVT1-216ENST00000523068 SLC6A17Q9H1V8 727 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 SIX2Q9NPC8 291 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.3□□□□□ -0.6
PVT1-216ENST00000523068 ASNSD1Q9NWL6 643 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 STIM2Q9P246 746 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 USP36Q9P275 1121 aaKnown RBP11.3□□□□□ -0.6
PVT1-216ENST00000523068 TJP2Q9UDY2 1190 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 SUSD2Q9UGT4 822 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 SUN2Q9UH99 717 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 ATXN2Q99700 1313 aaKnown RBP11.3□□□□□ -0.6
PVT1-216ENST00000523068 FOXN3O00409 490 aaPredicted RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 CDX4O14627 284 aaPredicted RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 HSF2BPO75031 334 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 MOCS3O95396 460 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 MOCS2O96007 188 aaPredicted RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 IGLV3-25P01717 112 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 ASLP04424 464 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 CFIP05156 583 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 TPM2P07951 284 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 SERPINF2P08697 491 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 GNSP15586 552 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 ENGP17813 658 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 ABCB4P21439 1286 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 EEF1GP26641 437 aaKnown RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 CD70P32970 193 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 CLCN1P35523 988 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 TPMTP51580 245 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 COPAP53621 1224 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 ATXN3P54252 364 aaPredicted RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 ST8SIA6P61647 398 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 CDK17Q00537 523 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 TYRO3Q06418 890 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 CAMK2GQ13555 558 aaPredicted RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 CDH18Q13634 790 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 HSP90AA4PQ58FG1 418 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 DCAF6Q58WW2 860 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 TCP11X2Q5H9J9 407 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 MIIPQ5JXC2 388 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 C11orf57Q6ZUT1 292 aaPredicted RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 CHSY1Q86X52 802 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 ZDHHC17Q8IUH5 632 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 SLC41A1Q8IVJ1 513 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 CARNMT1Q8N4J0 409 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 WDTC1Q8N5D0 677 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 TOE1Q96GM8 510 aaKnown RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 CPXM1Q96SM3 734 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 NUP58Q9BVL2 599 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 NUCKS1Q9H1E3 243 aaKnown RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 PDCL3Q9H2J4 239 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 TMEM245Q9H330 911 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 SYNCQ9H7C4 482 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 FAM204AQ9H8W3 233 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 WSB2Q9NYS7 404 aaPredicted RBP11.29□□□□□ -0.6
PVT1-216ENST00000523068 SLC6A14Q9UN76 642 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 NFE2L3Q9Y4A8 694 aa11.29□□□□□ -0.6
PVT1-216ENST00000523068 PCDH15Q96QU1 1955 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 MEI4A8MW99 385 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 KCNU1A8MYU2 1149 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 H0Y626 953 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 LUC7L3O95232 432 aaKnown RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 KCNK5O95279 499 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 IGLV3-19P01714 112 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 SYPP08247 313 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 HLA-EP13747 358 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 CCR1P32246 355 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 RPS24P62847 133 aaKnown RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 ZBTB16Q05516 673 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 TAF5Q15542 800 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 PTPRNQ16849 979 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 ZC3H12AQ5D1E8 599 aaKnown RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 KLHDC7AQ5VTJ3 777 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 TTC39BQ5VTQ0 682 aaPredicted RBP11.28□□□□□ -0.6
PVT1-216ENST00000523068 OR6B2Q6IFH4 312 aa11.28□□□□□ -0.6
PVT1-216ENST00000523068 FAM183BPQ6ZVS7 135 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms