RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 LMAN2Q12907 356 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 C15orf59Q2T9L4 293 aaPredicted RBP18.49■□□□□ 0.55
CLK4-211ENST00000522556 EOGTQ5NDL2 527 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 ARTNQ5T4W7 220 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 CHST9Q7L1S5 443 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 ZNF571Q7Z3V5 609 aaPredicted RBP18.49■□□□□ 0.55
CLK4-211ENST00000522556 BNIPLQ7Z465 357 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 ADIPOR2Q86V24 386 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 RASSF3Q86WH2 238 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 PHF13Q86YI8 300 aaPredicted RBP18.49■□□□□ 0.55
CLK4-211ENST00000522556 CHPFQ8IZ52 775 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 CARNMT1Q8N4J0 409 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 CAMKK1Q8N5S9 505 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 FRMD1Q8N878 549 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 RNF34Q969K3 372 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 IGSF8Q969P0 613 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 CIPCQ9C0C6 399 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 HAUS4Q9H6D7 363 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 CD93Q9NPY3 652 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLK4-211ENST00000522556 ADAM22Q9P0K1 906 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 GGA2Q9UJY4 613 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 INTS6Q9UL03 887 aaKnown RBP18.49■□□□□ 0.55
CLK4-211ENST00000522556 MYO6Q9UM54 1294 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 HS3ST4Q9Y661 456 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 PIEZO1Q92508 2521 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 SPAG17Q6Q759 2223 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 TMCO5BA8MYB1 307 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 ATMINO43313 823 aaPredicted RBP18.48■□□□□ 0.55
CLK4-211ENST00000522556 PABPC1P11940 636 aaKnown RBP18.48■□□□□ 0.55
CLK4-211ENST00000522556 NTSR1P30989 418 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 GBP1P32455 592 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 CXCR3P49682 368 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 DGKEP52429 567 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 ZNF445P59923 1031 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 ATP11AP98196 1134 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 DEUP1Q05D60 604 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 SIM2Q14190 667 aaPredicted RBP18.48■□□□□ 0.55
CLK4-211ENST00000522556 ZNF234Q14588 700 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 CDO1Q16878 200 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 SLC25A52Q3SY17 297 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 PREPLQ4J6C6 727 aaPredicted RBP18.48■□□□□ 0.55
CLK4-211ENST00000522556 SFMBT2Q5VUG0 894 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 FBXL22Q6P050 247 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 KIAA0907Q7Z7F0 614 aaPredicted RBP18.48■□□□□ 0.55
CLK4-211ENST00000522556 MFN1Q8IWA4 741 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 ZNF366Q8N895 744 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLK4-211ENST00000522556 ATP6V0D2Q8N8Y2 350 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 MSANTD4Q8NCY6 345 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 OR52K2Q8NGK3 314 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 HMGB4Q8WW32 186 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 RXFP2Q8WXD0 754 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 RLN3Q8WXF3 142 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 GABRG3Q99928 467 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 SLC2A11Q9BYW1 496 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 ELOVL2Q9NXB9 296 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 AIPL1Q9NZN9 384 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 VANGL2Q9ULK5 521 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 STAP1Q9ULZ2 295 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 STON1Q9Y6Q2 735 aa18.48■□□□□ 0.55
CLK4-211ENST00000522556 C2CD4BA6NLJ0 364 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 DDX3XO00571 662 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLK4-211ENST00000522556 LUC7L3O95232 432 aaKnown RBP18.47■□□□□ 0.55
CLK4-211ENST00000522556 GYPCP04921 128 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 PLEKP08567 350 aaPredicted RBP18.47■□□□□ 0.55
CLK4-211ENST00000522556 HLA-EP13747 358 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 GABRG2P18507 467 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 BCKDHBP21953 392 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 HSF5Q4G112 596 aaPredicted RBP18.47■□□□□ 0.55
CLK4-211ENST00000522556 KBTBD6Q86V97 674 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 FAM131BQ86XD5 332 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 FAM160A2Q8N612 972 aaPredicted RBP18.47■□□□□ 0.55
CLK4-211ENST00000522556 CCDC26Q8TAB7 109 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 CPLX3Q8WVH0 158 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 GAB3Q8WWW8 586 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 PGAP3Q96FM1 320 aaPredicted RBP18.47■□□□□ 0.55
CLK4-211ENST00000522556 MAGEB5Q9BZ81 275 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 TKTL2Q9H0I9 626 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 SIK2Q9H0K1 926 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 ARHGEF38Q9NXL2 777 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 THAP10Q9P2Z0 257 aaPredicted RBP18.47■□□□□ 0.55
CLK4-211ENST00000522556 EBF1Q9UH73 591 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 NYNRINQ9P2P1 1898 aaKnown RBP18.47■□□□□ 0.55
CLK4-211ENST00000522556 PLXND1Q9Y4D7 1925 aa18.47■□□□□ 0.55
CLK4-211ENST00000522556 F5H5T6 163 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 RPP40O75818 363 aaKnown RBP18.46■□□□□ 0.55
CLK4-211ENST00000522556 ABCB4P21439 1286 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 TNFAIP3P21580 790 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 RRM1P23921 792 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 RFC1P35251 1148 aaPredicted RBP18.46■□□□□ 0.55
CLK4-211ENST00000522556 PRKCIP41743 596 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 GSCP56915 257 aaPredicted RBP18.46■□□□□ 0.55
CLK4-211ENST00000522556 AUHQ13825 339 aaKnown RBP18.46■□□□□ 0.55
CLK4-211ENST00000522556 PTPRNQ16849 979 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 CCDC14Q49A88 953 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 FIGNQ5HY92 759 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 MPP7Q5T2T1 576 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 HGSNATQ68CP4 663 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 MBLAC2Q68D91 279 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms