RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PIH1D1Q9NWS0 290 aaKnown RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 WWOXQ9NZC7 414 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 EIF3LQ9Y262 564 aaKnown RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 R3HDM2Q9Y2K5 976 aaKnown RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 NUP98P52948 1817 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 IRF1P10914 325 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 CD151P48509 253 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 SLC11A2P49281 568 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 NUP107P57740 925 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 POU6F1Q14863 301 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 VSTM1Q6UX27 236 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 HORMAD1Q86X24 394 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 TDRPQ86YL5 185 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 BRD8Q9H0E9 1235 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 RNF103O00237 685 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 PRRG1O14668 218 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 TPH1P17752 444 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 HLA-DPA1P20036 260 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 CDK7P50613 346 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 NME5P56597 212 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 PLIN5Q00G26 463 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 ZNF177Q13360 481 aaPredicted RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 NFYCQ13952 458 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 OASLQ15646 514 aaKnown RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 KCNMB4Q86W47 210 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 TRAPPC12Q8WVT3 735 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 FHDC1Q9C0D6 1143 aaPredicted RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 ACSS3Q9H6R3 686 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 TMEM134Q9H6X4 195 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 SSU72Q9NP77 194 aaKnown RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 ANKRD36CQ5JPF3 1778 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 GPR182O15218 404 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 ARHGEF9O43307 516 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 PLA2G6O60733 806 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 CNTN2Q02246 1040 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 ADIGQ0VDE8 80 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 AARS2Q5JTZ9 985 aaKnown RBP14.13□□□□□ -0.15
SYNPO-205ENST00000522122 SPANXN3Q5MJ09 141 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 NT5DC4Q86YG4 428 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 SLC22A9Q8IVM8 553 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 FAM13CQ8NE31 585 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 RIN3Q8TB24 985 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 CPNE1Q99829 537 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 RRN3Q9NYV6 651 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 SEPT3Q9UH03 358 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 NAV1Q8NEY1 1877 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 PMM2O15305 246 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 ASMTLO95671 621 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 NPY2RP49146 381 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 PRKAA2P54646 552 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 GTF2H3Q13889 308 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 USP13Q92995 863 aaPredicted RBP14.13□□□□□ -0.15
SYNPO-205ENST00000522122 FAM136AQ96C01 138 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 SLCO1B3Q9NPD5 702 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 VTI1BQ9UEU0 232 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 TRHDEQ9UKU6 1024 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 SPDYE5A6NIY4 337 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 HACD1B0YJ81 288 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 CHADO15335 359 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 DCXO43602 365 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 ENTPD5O75356 428 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 MT-CO1P00395 513 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 TPBGLP0DKB5 382 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 TCEAL1Q15170 157 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 CCDC85BQ15834 202 aaPredicted RBP14.13□□□□□ -0.15
SYNPO-205ENST00000522122 SPDYE7PQ495Y7 208 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 PAN2Q504Q3 1202 aaKnown RBP14.13□□□□□ -0.15
SYNPO-205ENST00000522122 CACHD1Q5VU97 1274 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 MON1BQ7L1V2 547 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 DEFB106AQ8N104 65 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 CELF6Q96J87 481 aaKnown RBP14.13□□□□□ -0.15
SYNPO-205ENST00000522122 CATSPER2Q96P56 530 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 PIDD1Q9HB75 910 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 AKAP11Q9UKA4 1901 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 NR5A2O00482 541 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 ZACNQ401N2 412 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 TCHHL1Q5QJ38 904 aaPredicted RBP14.13□□□□□ -0.15
SYNPO-205ENST00000522122 CES3Q6UWW8 571 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 NT5MQ9NPB1 228 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 GPRC5DQ9NZD1 345 aa14.13□□□□□ -0.15
SYNPO-205ENST00000522122 PAIP2BQ9ULR5 123 aaKnown RBP14.13□□□□□ -0.15
SYNPO-205ENST00000522122 F5H5T6 163 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 RPL22P35268 128 aaKnown RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 GALNTL6Q49A17 601 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 FBXO32Q969P5 355 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 LENG9Q96B70 501 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 NMD3Q96D46 503 aaKnown RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 PHACTR1Q9C0D0 580 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 DDX43Q9NXZ2 648 aaKnown RBP14.12□□□□□ -0.15
SYNPO-205ENST00000522122 UBR2Q8IWV8 1755 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 GLP2RO95838 553 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 HOXD13P35453 343 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 PKN3Q6P5Z2 889 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 POLNQ7Z5Q5 900 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 RAB42Q8N4Z0 105 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 ZCWPW1Q9H0M4 648 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 SETD4Q9NVD3 440 aa14.12□□□□□ -0.15
SYNPO-205ENST00000522122 TBC1D13Q9NVG8 400 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms