RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 SFSWAPQ12872 951 aaKnown RBP15.49■□□□□ 0.07
PRKDC-204ENST00000521331 NUGGCQ68CJ6 796 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 ZNF776Q68DI1 518 aaPredicted RBP15.49■□□□□ 0.07
PRKDC-204ENST00000521331 MSANTD2Q6P1R3 559 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 C19orf48Q6RUI8 117 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 SMYD4Q8IYR2 804 aaPredicted RBP15.49■□□□□ 0.07
PRKDC-204ENST00000521331 UBA3Q8TBC4 463 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 MDM1Q8TC05 714 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 IRGQQ8WZA9 623 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 BIRC7Q96CA5 298 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 TSG101Q99816 390 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 RMND1Q9NWS8 449 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 SCML1Q9UN30 329 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 NCKAP1Q9Y2A7 1128 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 ATP6V1DQ9Y5K8 247 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 SLCO1B1Q9Y6L6 691 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 KNL1Q8NG31 2342 aa15.49■□□□□ 0.07
PRKDC-204ENST00000521331 TNFSF14O43557 240 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 DFNA5O60443 496 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 TBL1XO60907 577 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 FSBPO95073 299 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 IGLV3-27P01718 113 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 PAEPP09466 180 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 LCP1P13796 627 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 FKBP3Q00688 224 aaKnown RBP15.48■□□□□ 0.07
PRKDC-204ENST00000521331 INAVAQ3KP66 663 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 PKDCCQ504Y2 493 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 PIK3R6Q5UE93 754 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 LCLAT1Q6UWP7 414 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 USP30Q70CQ3 517 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 ADAT2Q7Z6V5 191 aaKnown RBP15.48■□□□□ 0.07
PRKDC-204ENST00000521331 AZIN2Q96A70 460 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 GOLPH3LQ9H4A5 285 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.48■□□□□ 0.07
PRKDC-204ENST00000521331 BTBD3Q9Y2F9 522 aa15.48■□□□□ 0.07
PRKDC-204ENST00000521331 TYW5A2RUC4 315 aaKnown RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 PAPSS1O43252 624 aaPredicted RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 RNASEH1O60930 286 aaKnown RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 CD70P32970 193 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 CTSKP43235 329 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 SGSHP51688 502 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 ST8SIA6P61647 398 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 COL28A1Q2UY09 1125 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 COBLL1Q53SF7 1204 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 FAM133BQ5BKY9 247 aaKnown RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 RFWD3Q6PCD5 774 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 PDZD3Q86UT5 571 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 MFN1Q8IWA4 741 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 ZC3H3Q8IXZ2 948 aaKnown RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 UBR7Q8N806 425 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 HJURPQ8NCD3 748 aaPredicted RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 WFDC5Q8TCV5 224 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 TTC17Q96AE7 1141 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 DDX50Q9BQ39 737 aaKnown RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 RSPH9Q9H1X1 276 aaPredicted RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 SCUBE2Q9NQ36 999 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 ARMCX3Q9UH62 379 aaPredicted RBP15.47■□□□□ 0.07
PRKDC-204ENST00000521331 RAXQ9Y2V3 346 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 CABIN1Q9Y6J0 2220 aa15.47■□□□□ 0.07
PRKDC-204ENST00000521331 GOLGA8CPA6NN73 597 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 ACSL4O60488 711 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 ASLP04424 464 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 PRCPP42785 496 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 C21orf59P57076 290 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 TBX4P57082 545 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 RACK1P63244 317 aaKnown RBP15.46■□□□□ 0.07
PRKDC-204ENST00000521331 STILQ15468 1287 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 CNGA2Q16280 664 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 KIAA0895LQ68EN5 471 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 CCDC117Q8IWD4 279 aaPredicted RBP15.46■□□□□ 0.07
PRKDC-204ENST00000521331 KDM1BQ8NB78 822 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 FIBINQ8TAL6 211 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 GANCQ8TET4 914 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 SLC35F5Q8WV83 523 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 SLC35C1Q96A29 364 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 SKA1Q96BD8 255 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 HSFY1Q96LI6 401 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 ACE2Q9BYF1 805 aaPredicted RBP15.46■□□□□ 0.07
PRKDC-204ENST00000521331 PABPC3Q9H361 631 aaKnown RBP15.46■□□□□ 0.07
PRKDC-204ENST00000521331 ZDHHC9Q9Y397 364 aa15.46■□□□□ 0.07
PRKDC-204ENST00000521331 GOLGA6L7A0A1B0GV03 622 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 A0A1W2PPC4 97 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 H0Y8X5 98 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 VILLO15195 856 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 FBXO21O94952 628 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 LTFP02788 710 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 IGHV4-34P06331 123 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 SLC6A4P31645 630 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 RGS7P49802 495 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 LRRC63Q05C16 580 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 LRMPQ12912 555 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 PNOCQ13519 176 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 ARID5BQ14865 1188 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 SMAD1Q15797 465 aaKnown RBP15.45■□□□□ 0.06
PRKDC-204ENST00000521331 HNRNPA1L2Q32P51 320 aaKnown RBP15.45■□□□□ 0.06
PRKDC-204ENST00000521331 ZNF658Q5TYW1 1059 aaPredicted RBP15.45■□□□□ 0.06
PRKDC-204ENST00000521331 PMF1Q6P1K2 205 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 TMEM270Q6UE05 265 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 LAYNQ6UX15 382 aa15.45■□□□□ 0.06
PRKDC-204ENST00000521331 TFAP2BQ92481 460 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms