RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 RXRAP19793 462 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 SFPQP23246 707 aaKnown RBP eCLIP5.78□□□□□ -1.48
SKP1-208ENST00000521216 RBM5P52756 815 aaKnown RBP eCLIP5.78□□□□□ -1.48
SKP1-208ENST00000521216 RCAN1P53805 252 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 SLC37A1P57057 533 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 FOXL2P58012 376 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 SHC2P98077 582 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 TLE3Q04726 772 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 SRSF4Q08170 494 aaKnown RBP5.78□□□□□ -1.48
SKP1-208ENST00000521216 BIRC3Q13489 604 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 ANXA2RQ3ZCQ2 193 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 LRRC24Q50LG9 513 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 GLE1Q53GS7 698 aaKnown RBP5.78□□□□□ -1.48
SKP1-208ENST00000521216 ZNF813Q6ZN06 617 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 TFAP2DQ7Z6R9 452 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 ZNF354CQ86Y25 554 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 UEVLDQ8IX04 471 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 FTSJ3Q8IY81 847 aaKnown RBP5.78□□□□□ -1.48
SKP1-208ENST00000521216 ASB12Q8WXK4 309 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 ZNF845Q96IR2 970 aaPredicted RBP5.78□□□□□ -1.48
SKP1-208ENST00000521216 QTRT1Q9BXR0 403 aaKnown RBP5.78□□□□□ -1.48
SKP1-208ENST00000521216 CHODLQ9H9P2 273 aa5.78□□□□□ -1.48
SKP1-208ENST00000521216 LOC102724159A0A0B4J2E5 919 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 PPP6CO00743 305 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 INPPL1O15357 1258 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 HEXIM1O94992 359 aaKnown RBP5.77□□□□□ -1.49
SKP1-208ENST00000521216 TUBB4AP04350 444 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 CYP3A4P08684 503 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 ST6GAL1P15907 406 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 CERS1P27544 350 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 ADD2P35612 726 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 ARHGAP25P42331 645 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 PCP4P48539 62 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 ZNF84P51523 738 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 ARL4CP56559 192 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 FOXF2Q12947 444 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 PWP2Q15269 919 aaKnown RBP5.77□□□□□ -1.49
SKP1-208ENST00000521216 DGAT2L7PQ6IED9 249 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 DPY19L2P1Q6NXN4 242 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 RINLQ6ZS11 566 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 CPXCR1Q8N123 301 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 ADPRHL1Q8NDY3 354 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 MAP4K1Q92918 833 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 FCRL5Q96RD9 977 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 ISCA1Q9BUE6 129 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 TM2D2Q9BX73 214 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 OSBPL5Q9H0X9 879 aaPredicted RBP5.77□□□□□ -1.49
SKP1-208ENST00000521216 LZTS1Q9Y250 596 aa5.77□□□□□ -1.49
SKP1-208ENST00000521216 COPG1Q9Y678 874 aaKnown RBP5.77□□□□□ -1.49
SKP1-208ENST00000521216 WIPF3A6NGB9 483 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 MBD3L5A6NJ08 208 aaPredicted RBP5.76□□□□□ -1.49
SKP1-208ENST00000521216 C3orf70A6NLC5 250 aaPredicted RBP5.76□□□□□ -1.49
SKP1-208ENST00000521216 B9A039 149 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 ALDOCP09972 364 aaKnown RBP5.76□□□□□ -1.49
SKP1-208ENST00000521216 EPHB2P29323 1055 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 IDUAP35475 653 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 PPFIA1Q13136 1202 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 SYCE2Q6PIF2 218 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 KIAA1324Q6UXG2 1013 aaKnown RBP5.76□□□□□ -1.49
SKP1-208ENST00000521216 YTHDF3Q7Z739 585 aaKnown RBP5.76□□□□□ -1.49
SKP1-208ENST00000521216 C2CD5Q86YS7 1000 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 ZSCAN31Q96LW9 406 aaPredicted RBP5.76□□□□□ -1.49
SKP1-208ENST00000521216 PIGSQ96S52 555 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 FAM118BQ9BPY3 351 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 HTATIP2Q9BUP3 242 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 SFXN1Q9H9B4 322 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 PDE11AQ9HCR9 933 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.76□□□□□ -1.49
SKP1-208ENST00000521216 LUZP4Q9P127 313 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 GPR52Q9Y2T5 361 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 DGKBQ9Y6T7 804 aa5.76□□□□□ -1.49
SKP1-208ENST00000521216 FAM155BO75949 473 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 CNTN5O94779 1100 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 PLAUP00749 431 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 CYP21A2P08686 494 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 RFPL3SP0C7P2 107 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 CDK7P50613 346 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 DMWDQ09019 674 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 SRSF7Q16629 238 aaKnown RBP eCLIP5.75□□□□□ -1.49
SKP1-208ENST00000521216 SUPT20HL1Q3ZLR7 823 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 SLC18B1Q6NT16 456 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 TMEM88Q6PEY1 159 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 RBM44Q6ZP01 1051 aaKnown RBP5.75□□□□□ -1.49
SKP1-208ENST00000521216 RFX6Q8HWS3 928 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 RHPN2Q8IUC4 686 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 ANKRD18AQ8IVF6 992 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 GALNT16Q8N428 558 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 FSIP1Q8NA03 581 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 ZNF398Q8TD17 642 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 NTN5Q8WTR8 489 aaPredicted RBP5.75□□□□□ -1.49
SKP1-208ENST00000521216 THAP4Q8WY91 577 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 KCNJ9Q92806 393 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 KAT2BQ92831 832 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 ARRDC3Q96B67 414 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 ABHD16BQ9H3Z7 469 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 FLRT1Q9NZU1 646 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 IPO11Q9UI26 975 aaKnown RBP5.75□□□□□ -1.49
SKP1-208ENST00000521216 FEM1BQ9UK73 627 aa5.75□□□□□ -1.49
SKP1-208ENST00000521216 CYP3A7-CYP3A51PA0A087WV96 503 aa5.74□□□□□ -1.49
SKP1-208ENST00000521216 SMIM35A0A1B0GVV1 85 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms