RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 CYTH4Q9UIA0 394 aa16.43■□□□□ 0.22
CLN8-205ENST00000520991 CKAP5Q14008 2032 aa16.43■□□□□ 0.22
CLN8-205ENST00000520991 TPRP12270 2363 aaKnown RBP16.42■□□□□ 0.22
CLN8-205ENST00000520991 GTPBP10A4D1E9 387 aaKnown RBP16.42■□□□□ 0.22
CLN8-205ENST00000520991 BECN2A8MW95 431 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 ARHGAP33O14559 1287 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 OPHN1O60890 802 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 MAOBP27338 520 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 RPS24P62847 133 aaKnown RBP16.42■□□□□ 0.22
CLN8-205ENST00000520991 SHC2P98077 582 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 APBA1Q02410 837 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 CDH18Q13634 790 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 PTPRNQ16849 979 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 SYPL2Q5VXT5 272 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 TMEM110Q86TL2 294 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 FAM124AQ86V42 546 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 CARNMT1Q8N4J0 409 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 MINDY1Q8N5J2 469 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 CADM4Q8NFZ8 388 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 SLC39A13Q96H72 371 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 NUCKS1Q9H1E3 243 aaKnown RBP16.42■□□□□ 0.22
CLN8-205ENST00000520991 MIR1-1HGQ9H1L0 117 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 LHX5Q9H2C1 402 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 CLSTN2Q9H4D0 955 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 THAP9Q9H5L6 903 aa16.42■□□□□ 0.22
CLN8-205ENST00000520991 MUC22E2RYF6 1773 aaPredicted RBP16.41■□□□□ 0.22
CLN8-205ENST00000520991 IGLV3-19P01714 112 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 PON1P27169 355 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 ST8SIA6P61647 398 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 YWHAZP63104 245 aaKnown RBP16.41■□□□□ 0.22
CLN8-205ENST00000520991 FOXC1Q12948 553 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 ZC3H12AQ5D1E8 599 aaKnown RBP16.41■□□□□ 0.22
CLN8-205ENST00000520991 MS4A13Q5J8X5 152 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 CHSY1Q86X52 802 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 IRF2BP1Q8IU81 584 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 PASD1Q8IV76 773 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 FAM114A1Q8IWE2 563 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 FIBINQ8TAL6 211 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 SHC3Q92529 594 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 NOX5Q96PH1 765 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 FAM204AQ9H8W3 233 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 FBRSQ9HAH7 460 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 TJP2Q9UDY2 1190 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 SUN2Q9UH99 717 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 NFE2L3Q9Y4A8 694 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 ADAMTS9Q9P2N4 1935 aa16.41■□□□□ 0.22
CLN8-205ENST00000520991 PCDH15Q96QU1 1955 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 A0A1B0GTW7 788 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 TRUB2O95900 331 aaKnown RBP16.4■□□□□ 0.22
CLN8-205ENST00000520991 PRKCSHP14314 528 aaPredicted RBP16.4■□□□□ 0.22
CLN8-205ENST00000520991 PTK2Q05397 1052 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 SEMA3BQ13214 749 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 MAN2A1Q16706 1144 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 DCAF6Q58WW2 860 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 DCAF12L1Q5VU92 463 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 RAP1GAP2Q684P5 730 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 LGI2Q8N0V4 545 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 CFAP52Q8N1V2 620 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 ZCCHC9Q8N567 271 aaKnown RBP16.4■□□□□ 0.22
CLN8-205ENST00000520991 OR2I1PQ8NGU4 316 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 DNASE2BQ8WZ79 361 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 MYEOVQ96EZ4 313 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 PPP1R13BQ96KQ4 1090 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 BTN2A3PQ96KV6 586 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 PRSS16Q9NQE7 514 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 DACH1Q9UI36 760 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 XPO7Q9UIA9 1087 aaKnown RBP16.4■□□□□ 0.22
CLN8-205ENST00000520991 CHD8Q9HCK8 2581 aa16.4■□□□□ 0.22
CLN8-205ENST00000520991 ASCC3Q8N3C0 2202 aaKnown RBP16.39■□□□□ 0.21
CLN8-205ENST00000520991 METTL12A8MUP2 240 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 UPK3BL1B0FP48 263 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 UPK3BL2E5RIL1 263 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 H0Y626 953 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 LUC7L3O95232 432 aaKnown RBP16.39■□□□□ 0.21
CLN8-205ENST00000520991 MOCS3O95396 460 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 DNTTP04053 509 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 ASLP04424 464 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 KRT9P35527 623 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 CSKP41240 450 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 CDK17Q00537 523 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 GRIK2Q13002 908 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 ST3GAL2Q16842 350 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 DPCR1Q3MIW9 517 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 TTC31Q49AM3 519 aaPredicted RBP16.39■□□□□ 0.21
CLN8-205ENST00000520991 ATP6V0D2Q8N8Y2 350 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 SNX19Q92543 992 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 TTC17Q96AE7 1141 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 CPXM1Q96SM3 734 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 ZDHHC5Q9C0B5 715 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 DNAAF2Q9NVR5 837 aaKnown RBP16.39■□□□□ 0.21
CLN8-205ENST00000520991 SLC12A6Q9UHW9 1150 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 DNAJC12Q9UKB3 198 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 PCDHGC3Q9UN70 934 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 CEP83Q9Y592 693 aa16.39■□□□□ 0.21
CLN8-205ENST00000520991 EPG5Q9HCE0 2579 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 SYNJ2BP-COX16A0A087WUM0 186 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 F5H5T6 163 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 PES1O00541 588 aaKnown RBP16.38■□□□□ 0.21
CLN8-205ENST00000520991 IGLV3-25P01717 112 aa16.38■□□□□ 0.21
CLN8-205ENST00000520991 GLI1P08151 1106 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms