RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 FNIP1Q8TF40 1166 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 CLEC4CQ8WTT0 213 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 KRT35Q92764 455 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 ASIC4Q96FT7 647 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 IGSF21Q96ID5 467 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 MS4A14Q96JA4 679 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 MCEEQ96PE7 176 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 KCNK16Q96T55 309 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 PSMB7Q99436 277 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 MED10Q9BTT4 135 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 SELENOOQ9BVL4 669 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 RHOBTB2Q9BYZ6 727 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 MIS12Q9H081 205 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 SYNCQ9H7C4 482 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 ST7Q9NRC1 585 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 METTL5Q9NRN9 209 aaKnown RBP8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 CHST7Q9NS84 486 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 IP6K2Q9UHH9 426 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 PCDHA3Q9Y5H8 950 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 DENND4CQ5VZ89 1909 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 ANAPC1Q9H1A4 1944 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 SF3B1O75533 1304 aaKnown RBP eCLIP8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 DOCK6Q96HP0 2047 aa8.22□□□□□ -1.09
CTHRC1-203ENST00000520337 OR6C75A6NL08 312 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 C2CD4BA6NLJ0 364 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 MIF4GDA9UHW6 222 aaKnown RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 F8VP50 259 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 KCNK3O14649 394 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 PAGE1O75459 146 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 GJB5O95377 273 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 VNN2O95498 520 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 CEACAM5P06731 702 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 LCP1P13796 627 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 TCF4P15884 667 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 SYN1P17600 705 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 BDNFP23560 247 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 CTNNA1P35221 906 aaKnown RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 NDUFV1P49821 464 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 DNA2P51530 1060 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 SNX16P57768 344 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 TUBB4BP68371 445 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 TSPY1Q01534 308 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 PRKCQQ04759 706 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 RING1Q06587 406 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 ELAVL2Q12926 359 aaKnown RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 FZD5Q13467 585 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 BTG3Q14201 252 aaPredicted RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 PIGHQ14442 188 aaPredicted RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 MAPRE1Q15691 268 aaKnown RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 CTXN3Q4LDR2 81 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 RAB41Q5JT25 222 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 FAM102AQ5T9C2 384 aaPredicted RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 DAB2IPQ5VWQ8 1189 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 DCUN1D2Q6PH85 259 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 SLC26A9Q7LBE3 791 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 GPRIN1Q7Z2K8 1008 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 ZNF572Q7Z3I7 529 aaPredicted RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 CEP57Q86XR8 500 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 ZDHHC17Q8IUH5 632 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 PLD6Q8N2A8 252 aaKnown RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 EMC1Q8N766 993 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 COLGALT1Q8NBJ5 622 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 KCT2Q8NC54 265 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 GRIN3AQ8TCU5 1115 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 HERVK_113Q902F9 699 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 NDRG1Q92597 394 aaKnown RBP8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 SMARCD1Q96GM5 515 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 PBKQ96KB5 322 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 CAPZA3Q96KX2 299 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 ZNF558Q96NG5 402 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 TTPALQ9BTX7 342 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 SMARCAL1Q9NZC9 954 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 MYO9BQ13459 2157 aa8.21□□□□□ -1.1
CTHRC1-203ENST00000520337 CCDC66A2RUB6 948 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 H7C4K7 107 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 ADAM12O43184 909 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 SPOPO43791 374 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 TADA3O75528 432 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 LEFTY1O75610 366 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 GRAP2O75791 330 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 PYGMP11217 842 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 LAG3P18627 525 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 CYP2F1P24903 491 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 PSMA2P25787 234 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 FLT3P36888 993 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 TKTL1P51854 596 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 ZNF143P52747 638 aaPredicted RBP8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 SLC8A3P57103 927 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 RNASE9P60153 205 aaKnown RBP8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 ADIGQ0VDE8 80 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 GPR17Q13304 367 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 PLCL1Q15111 1095 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 USP41Q3LFD5 358 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 CCDC14Q49A88 953 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 SLC39A12Q504Y0 691 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 RAB6CQ53S08 254 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 RASIP1Q5U651 963 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 ZNF280DQ6N043 979 aa8.2□□□□□ -1.1
CTHRC1-203ENST00000520337 CC2D1AQ6P1N0 951 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms