RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 F7P08709 466 aaPredicted RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 INSRRP14616 1297 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 PTPN9P43378 593 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 HNRNPDQ14103 355 aaKnown RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 PDPK2PQ6A1A2 396 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 LRRC8BQ6P9F7 803 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 PHTF2Q8N3S3 785 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 COLGALT1Q8NBJ5 622 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 SLC26A7Q8TE54 656 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 ZFAND2BQ8WV99 257 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 TFB1MQ8WVM0 346 aaKnown RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 PPP2R3CQ969Q6 453 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 SPATA13Q96N96 652 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 GBP5Q96PP8 586 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 DPEP3Q9H4B8 488 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 COPG2Q9UBF2 871 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 DCDC2Q9UHG0 476 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 GTF2IRD1Q9UHL9 959 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 CDH22Q9UJ99 828 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 USP2O75604 605 aaPredicted RBP17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 CNMDO75829 334 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 ZMPSTE24O75844 475 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 ZFXP17010 805 aaPredicted RBP17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 SLC26A2P50443 739 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 RAB27AP51159 221 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 BTKQ06187 659 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 ASPHQ12797 758 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 MSLNQ13421 630 aaPredicted RBP17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 DNAJC28Q9NX36 388 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 SYBUQ9NX95 663 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
PCDHGA11-202ENST00000518882 LOC100653049A0A140TA62 436 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 MFSD11O43934 449 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 KRT34O76011 436 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 ERVK-10P10266 1014 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 TXNP10599 105 aaKnown RBP17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 MLNP12872 115 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 ALOX15P16050 662 aaPredicted RBP17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 ITGAXP20702 1163 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 SARNPP82979 210 aaKnown RBP17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 OLIG2Q13516 323 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 ITGA9Q13797 1035 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 GJC2Q5T442 439 aaPredicted RBP17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 FRMD7Q6ZUT3 714 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 CMC1Q7Z7K0 106 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 HIPK4Q8NE63 616 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 ACTRT2Q8TDY3 377 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 CDKL2Q92772 493 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 ATP2A3Q93084 1043 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 FAM192AQ9GZU8 254 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 AP1G2O75843 785 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 LCP1P13796 627 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 PGAM1P18669 254 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 NCF2P19878 526 aaPredicted RBP17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 PEX2P28328 305 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 MLH1P40692 756 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 ABCE1P61221 599 aaKnown RBP17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 TCHHL1Q5QJ38 904 aaPredicted RBP17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 GADL1Q6ZQY3 521 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 RASSF3Q86WH2 238 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 HPS6Q86YV9 775 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 C7orf31Q8N865 590 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 PPP4R1Q8TF05 950 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 AFG1LQ8WV93 481 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 AZIN2Q96A70 460 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 TMPRSS4Q9NRS4 437 aa17.01■□□□□ 0.31
PCDHGA11-202ENST00000518882 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17■□□□□ 0.31
PCDHGA11-202ENST00000518882 RNF103O00237 685 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 TSPAN1O60635 241 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 TOMM70O94826 608 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 SETSIPP0DME0 302 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 RALBP11234 206 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 CD1EP15812 388 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 DESP17661 470 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 PSMB4P28070 264 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 FDFT1P37268 417 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 HARS2P49590 506 aaKnown RBP17■□□□□ 0.31
PCDHGA11-202ENST00000518882 AQP4P55087 323 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 USP4Q13107 963 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 AP1ARQ63HQ0 302 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 MTHFD1LQ6UB35 978 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 SLC26A9Q7LBE3 791 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 DEFB107AQ8IZN7 70 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 TNS4Q8IZW8 715 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 TTC39CQ8N584 583 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 LINC01465Q8N7H1 131 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 P2RY11Q96G91 374 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 ZMAT2Q96NC0 199 aaKnown RBP17■□□□□ 0.31
PCDHGA11-202ENST00000518882 TRIM4Q9C037 500 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 MAN1C1Q9NR34 630 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 RNF19AQ9NV58 838 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 ZDHHC7Q9NXF8 308 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 POMPQ9Y244 141 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 OTOFQ9HC10 1997 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 SF3B1O75533 1304 aaKnown RBP eCLIP17■□□□□ 0.31
PCDHGA11-202ENST00000518882 FZD9O00144 591 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 DCXO43602 365 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 ZBTB14O43829 449 aa17■□□□□ 0.31
PCDHGA11-202ENST00000518882 CCDC130P13994 396 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms