RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SH3PXD2AQ5TCZ1 1133 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 CHST9Q7L1S5 443 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 ZNF677Q86XU0 584 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 KIAA2013Q8IYS2 634 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 CARNMT1Q8N4J0 409 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 ZNF366Q8N895 744 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 KCNV2Q8TDN2 545 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 SYT11Q9BT88 431 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 SLC2A11Q9BYW1 496 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 CIPCQ9C0C6 399 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 TTYH3Q9C0H2 523 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 DUSP15Q9H1R2 295 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-219ENST00000518824 METTL5Q9NRN9 209 aaKnown RBP13.79□□□□□ -0.2
VEGFA-219ENST00000518824 TAS2R14Q9NYV8 317 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.79□□□□□ -0.24e-6■□□□□ 10.5
VEGFA-219ENST00000518824 THAP10Q9P2Z0 257 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-219ENST00000518824 NCDNQ9UBB6 729 aa13.79□□□□□ -0.2
VEGFA-219ENST00000518824 LRRC53A6NM62 1247 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 SERPINC1P01008 464 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 PABPC1P11940 636 aaKnown RBP13.78□□□□□ -0.2
VEGFA-219ENST00000518824 NDUFV2P19404 249 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 CNR2P34972 360 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 CENPCQ03188 943 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 ENPP2Q13822 863 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 PTPRNQ16849 979 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 PLK5Q496M5 336 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 FBXL22Q6P050 247 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 CACNA2D4Q7Z3S7 1137 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 ZDHHC17Q8IUH5 632 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.78□□□□□ -0.27e-8■■□□□ 11.5
VEGFA-219ENST00000518824 HJURPQ8NCD3 748 aaPredicted RBP13.78□□□□□ -0.2
VEGFA-219ENST00000518824 OR52K2Q8NGK3 314 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 IGSF8Q969P0 613 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 NT5C3BQ969T7 300 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 BTN2A3PQ96KV6 586 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 CFAP57Q96MR6 1250 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 AGPAT1Q99943 283 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 TRIM62Q9BVG3 475 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 MAGEB5Q9BZ81 275 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 SMOC1Q9H4F8 434 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 MTG2Q9H4K7 406 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.78□□□□□ -0.22e-7■■■■□ 22.2
VEGFA-219ENST00000518824 MBD1Q9UIS9 605 aaPredicted RBP13.78□□□□□ -0.2
VEGFA-219ENST00000518824 GGA2Q9UJY4 613 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 DAAM1Q9Y4D1 1078 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 HS3ST4Q9Y661 456 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 WDR87Q6ZQQ6 2873 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 FRYLO94915 3013 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 THADAQ6YHU6 1953 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 CKAP5Q14008 2032 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 RALGAPA1Q6GYQ0 2036 aa13.78□□□□□ -0.2
VEGFA-219ENST00000518824 ZNF292O60281 2723 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 PAGE1O75459 146 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 CCR1P32246 355 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 SCNN1AP37088 669 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 PBX1P40424 430 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 CTSOP43234 321 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-219ENST00000518824 CXCR3P49682 368 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 ZNF445P59923 1031 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-219ENST00000518824 MAP7D1Q3KQU3 841 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 MBLAC2Q68D91 279 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 LAIR1Q6GTX8 287 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 NUDT18Q6ZVK8 323 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 BNIPLQ7Z465 357 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-219ENST00000518824 MFN1Q8IWA4 741 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 APCDD1Q8J025 514 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 PGBD3Q8N328 593 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 ATP6V0D2Q8N8Y2 350 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 FIBINQ8TAL6 211 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 RNF34Q969K3 372 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 POLMQ9NP87 494 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-219ENST00000518824 SEPT11Q9NVA2 429 aaKnown RBP13.77□□□□□ -0.21
VEGFA-219ENST00000518824 BCCIPQ9P287 314 aaKnown RBP eCLIP13.77□□□□□ -0.21
VEGFA-219ENST00000518824 VANGL2Q9ULK5 521 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 CFAP54Q96N23 3096 aa13.77□□□□□ -0.21
VEGFA-219ENST00000518824 PLXND1Q9Y4D7 1925 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 TCRBV5S1A1TA0A578 114 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 LUC7L3O95232 432 aaKnown RBP13.76□□□□□ -0.21
VEGFA-219ENST00000518824 SKILP12757 684 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 PTMSP20962 102 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 GBP1P32455 592 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 P2RY2P41231 377 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 SNX16P57768 344 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 ATP11AP98196 1134 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 DEUP1Q05D60 604 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 AUHQ13825 339 aaKnown RBP13.76□□□□□ -0.21
VEGFA-219ENST00000518824 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 SLC25A52Q3SY17 297 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 MPP7Q5T2T1 576 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 TRIM72Q6ZMU5 477 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 MON1BQ7L1V2 547 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 TRMT11Q7Z4G4 463 aaKnown RBP13.76□□□□□ -0.21
VEGFA-219ENST00000518824 CACUL1Q86Y37 369 aa13.76□□□□□ -0.21
VEGFA-219ENST00000518824 ZNF683Q8IZ20 524 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms