RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 CBWD2Q8IUF1 395 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 ZNF557Q8N988 423 aaPredicted RBP10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 P2RY11Q96G91 374 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 SERAC1Q96JX3 654 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 CGRRF1Q99675 332 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 TRIM4Q9C037 500 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 RSPH9Q9H1X1 276 aaPredicted RBP10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 ASCL3Q9NQ33 180 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 TBC1D7Q9P0N9 293 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 CCDC39Q9UFE4 941 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 NAGPAQ9UK23 515 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 AGO1Q9UL18 857 aaKnown RBP10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 PLXNA2O75051 1894 aa10.29□□□□□ -0.76
SH2D4A-202ENST00000518040 A0A1W2PQH9 124 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 MDM4O15151 490 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 CYP26A1O43174 497 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 DLDP09622 509 aaKnown RBP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 P4HA1P13674 534 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 MLLT3P42568 568 aaPredicted RBP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 BMT2Q1RMZ1 405 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 KIAA1614Q5VZ46 1190 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 SV2BQ7L1I2 683 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 CHST9Q7L1S5 443 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 FAM217AQ8IXS0 508 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 SLC2A14Q8TDB8 520 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 HPS3Q969F9 1004 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 NMUR1Q9HB89 426 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 USP29Q9HBJ7 922 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 STARD5Q9NSY2 213 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 HSPBP1Q9NZL4 362 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 STRIP2Q9ULQ0 834 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 SUV39H1O43463 412 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 SIGLEC6O43699 453 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 LZTS3O60299 673 aaPredicted RBP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 OPA1O60313 960 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 CSO75390 466 aaKnown RBP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 BEST1O76090 585 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 ITGB2P05107 769 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 HLA-FP30511 346 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 HARS2P49590 506 aaKnown RBP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 DUSP3P51452 185 aaPredicted RBP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 CASP5P51878 434 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 SKOR1P84550 965 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 UBAP2LQ14157 1087 aaKnown RBP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 PSMD6Q15008 389 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 SNRNP35Q16560 246 aaKnown RBP10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 ARL13BQ3SXY8 428 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 ZNF667Q5HYK9 610 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 NAPEPLDQ6IQ20 393 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 CCDC186Q7Z3E2 898 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 ACOT1Q86TX2 421 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 UNC93AQ86WB7 457 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 DENND1CQ8IV53 801 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 CRYBG2Q8N1P7 616 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 ARHGAP18Q8N392 663 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 CYB5D2Q8WUJ1 264 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 DNAJC19Q96DA6 116 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 OMDQ99983 421 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 ARHGAP9Q9BRR9 750 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 ABCG4Q9H172 646 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 XYLT2Q9H1B5 865 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 EBF2Q9HAK2 575 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 TJP2Q9UDY2 1190 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 RASAL2Q9UJF2 1139 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 NUDT5Q9UKK9 219 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 CLEC4EQ9ULY5 219 aa10.28□□□□□ -0.76
SH2D4A-202ENST00000518040 USP9XQ93008 2570 aaPredicted RBP10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 FRMD3A2A2Y4 597 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 C10orf142B7Z368 130 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 PPP1R3GB7ZBB8 358 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 STX6O43752 255 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 PHACTR2O75167 634 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 ALPPL2P10696 532 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 CKMT1AP12532 417 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 CCDC130P13994 396 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 IDEP14735 1019 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 POLR2EP19388 210 aaKnown RBP10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 AP3M2P53677 418 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 MYL6P60660 151 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 ST8SIA6P61647 398 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 ZNF699Q32M78 642 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 SND1Q7KZF4 910 aaKnown RBP eCLIP10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 KIAA0907Q7Z7F0 614 aaPredicted RBP10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 PRPF39Q86UA1 669 aaKnown RBP10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 ZNF366Q8N895 744 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 OR4C6Q8NH72 309 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 PLD4Q96BZ4 506 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 SLC46A1Q96NT5 459 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 SEMA3CQ99985 751 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 DNAI2Q9GZS0 605 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 SMYD3Q9H7B4 428 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 GGA2Q9UJY4 613 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 DMTF1Q9Y222 760 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 PCDHGA8Q9Y5G5 932 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 COL12A1Q99715 3063 aa10.27□□□□□ -0.77
SH2D4A-202ENST00000518040 LATO43561 262 aa10.26□□□□□ -0.77
SH2D4A-202ENST00000518040 RNASEH2AO75792 299 aaKnown RBP10.26□□□□□ -0.77
SH2D4A-202ENST00000518040 CLSTN1O94985 981 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms