RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 SIRT4Q9Y6E7 314 aaPredicted RBP5.9□□□□□ -1.46
FAM49B-204ENST00000517801 SPATA31A6Q5VVP1 1343 aa5.9□□□□□ -1.47
FAM49B-204ENST00000517801 LRRC3CA6NJW4 275 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 HEXIM1O94992 359 aaKnown RBP5.89□□□□□ -1.47
FAM49B-204ENST00000517801 CNPP09543 421 aaKnown RBP5.89□□□□□ -1.47
FAM49B-204ENST00000517801 CKMT1AP12532 417 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 ATF7P17544 494 aaPredicted RBP5.89□□□□□ -1.47
FAM49B-204ENST00000517801 RXRAP19793 462 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 RCAN1P53805 252 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 TLE2Q04725 743 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 CTXN3Q4LDR2 81 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 FCRLBQ6BAA4 426 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 KYAT3Q6YP21 454 aaKnown RBP5.89□□□□□ -1.47
FAM49B-204ENST00000517801 SLC39A5Q6ZMH5 540 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 ADGRG3Q86Y34 549 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 PTGR2Q8N8N7 351 aaPredicted RBP5.89□□□□□ -1.47
FAM49B-204ENST00000517801 ASB12Q8WXK4 309 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 EVI5LQ96CN4 794 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 KTI12Q96EK9 354 aaPredicted RBP5.89□□□□□ -1.47
FAM49B-204ENST00000517801 COG8Q96MW5 612 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 ZNF69Q9UC07 566 aa5.89□□□□□ -1.47
FAM49B-204ENST00000517801 RRP7AQ9Y3A4 280 aaKnown RBP5.89□□□□□ -1.47
FAM49B-204ENST00000517801 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.88□□□□□ -1.47
FAM49B-204ENST00000517801 TCRBV5S1A1TA0A578 114 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 TSPAN3O60637 253 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 NDUFS1P28331 727 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 HOXD12P35452 270 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 AGTR2P50052 363 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 UBE3AQ05086 875 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 SMN1Q16637 294 aaKnown RBP5.88□□□□□ -1.47
FAM49B-204ENST00000517801 CERKLQ49MI3 558 aaPredicted RBP5.88□□□□□ -1.47
FAM49B-204ENST00000517801 MAP3K21Q5TCX8 1036 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 PRIMA1Q86XR5 153 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 PAF1Q8N7H5 531 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 IL17REQ8NFR9 667 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 PNISRQ8TF01 805 aaKnown RBP5.88□□□□□ -1.47
FAM49B-204ENST00000517801 ZNF845Q96IR2 970 aaPredicted RBP5.88□□□□□ -1.47
FAM49B-204ENST00000517801 SENP7Q9BQF6 1050 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 C11orf21Q9P2W6 132 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 ANAPC4Q9UJX5 808 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 SLC13A4Q9UKG4 626 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 PCDHA10Q9Y5I2 948 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 COPG1Q9Y678 874 aaKnown RBP5.88□□□□□ -1.47
FAM49B-204ENST00000517801 COX11Q9Y6N1 276 aa5.88□□□□□ -1.47
FAM49B-204ENST00000517801 A0A1B0GVC2 190 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 AGAP5A6NIR3 686 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 SMIM22K7EJ46 135 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 CYP21A2P08686 494 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 TNNT1P13805 278 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 SFPQP23246 707 aaKnown RBP eCLIP5.87□□□□□ -1.47
FAM49B-204ENST00000517801 VAMP2P63027 116 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 PDCLQ13371 301 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 SLC12A1Q13621 1099 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 LVRNQ6Q4G3 990 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 BBS12Q6ZW61 710 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 CPOQ8IVL8 374 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 TWNKQ96RR1 684 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 HTATIP2Q9BUP3 242 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 TRIM2Q9C040 744 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 SFXN1Q9H9B4 322 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 PRDM16Q9HAZ2 1276 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 PDE11AQ9HCR9 933 aa5.87□□□□□ -1.47
FAM49B-204ENST00000517801 AOX1Q06278 1338 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 SPATA31A5Q5VU36 1347 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 SPATA31A7Q8IWB4 1347 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.86□□□□□ -1.47
FAM49B-204ENST00000517801 TMEM232C9JQI7 657 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 PRYO14603 147 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 PYGLP06737 847 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 PNPLA4P41247 253 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 STAT6P42226 847 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 GAB1Q13480 694 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 PFKFB3Q16875 520 aaPredicted RBP5.86□□□□□ -1.47
FAM49B-204ENST00000517801 PROSER3Q2NL68 480 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 C16orf71Q8IYS4 520 aaPredicted RBP5.86□□□□□ -1.47
FAM49B-204ENST00000517801 ENDOVQ8N8Q3 282 aaKnown RBP5.86□□□□□ -1.47
FAM49B-204ENST00000517801 P2RY11Q96G91 374 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 NUAK2Q9H093 628 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 PLEKHA2Q9HB19 425 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 WASH6PQ9NQA3 447 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 B3GNT3Q9Y2A9 372 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 DNAJC16Q9Y2G8 782 aa5.86□□□□□ -1.47
FAM49B-204ENST00000517801 HEMK1Q9Y5R4 338 aaPredicted RBP5.86□□□□□ -1.47
FAM49B-204ENST00000517801 CCDC196A0A1B0GTZ2 297 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 HOXC11O43248 304 aaPredicted RBP5.85□□□□□ -1.47
FAM49B-204ENST00000517801 SGPL1O95470 568 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 CHN1P15882 459 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 VPS41P49754 854 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 NHLH1Q02575 133 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 CHRNDQ07001 517 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 TBX2Q13207 712 aaPredicted RBP5.85□□□□□ -1.47
FAM49B-204ENST00000517801 TRPC3Q13507 836 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 GPR162Q16538 588 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 ZNF484Q5JVG2 852 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 CC2D1BQ5T0F9 858 aaKnown RBP5.85□□□□□ -1.47
FAM49B-204ENST00000517801 PRAMEF17Q5VTA0 474 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 RANBP10Q6VN20 620 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 ZNF788Q6ZQV5 615 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 CHSY1Q86X52 802 aa5.85□□□□□ -1.47
FAM49B-204ENST00000517801 NAXEQ8NCW5 288 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms