RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CRY2Q49AN0 593 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 IGSF11Q5DX21 431 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 TTC39AQ5SRH9 613 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 UTP14CQ5TAP6 766 aaKnown RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM160B1Q5W0V3 765 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 CST9LP1Q5W188 147 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 AFMIDQ63HM1 303 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 KANK2Q63ZY3 851 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 DRICH1Q6PGQ1 229 aaPredicted RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 SARM1Q6SZW1 724 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMEM270Q6UE05 265 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 CEP128Q6ZU80 1094 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 SEM1Q6ZVN7 128 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 LPCAT2Q7L5N7 544 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 GPRIN1Q7Z2K8 1008 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 ADCK2Q7Z695 626 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 ADCK1Q86TW2 530 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 KBTBD6Q86V97 674 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 HOOK3Q86VS8 718 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 GAS2L3Q86XJ1 694 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 PDSS2Q86YH6 399 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM185AQ8N0U4 392 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 HDDC3Q8N4P3 179 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 LILRA3Q8N6C8 439 aaPredicted RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLC17A8Q8NDX2 589 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 SHCBP1Q8NEM2 672 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 CEP76Q8TAP6 659 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 SMARCC2Q8TAQ2 1214 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 DUSP19Q8WTR2 217 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 NOC3LQ8WTT2 800 aaKnown RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 PPP2R3CQ969Q6 453 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 RNF166Q96A37 237 aaPredicted RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMCO6Q96DC7 493 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 RNFT2Q96EX2 444 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 CDCA5Q96FF9 252 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 REXO5Q96IC2 774 aaKnown RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 KLHL15Q96M94 604 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 DGAT2Q96PD7 388 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 ALPK1Q96QP1 1244 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 UBL7Q96S82 380 aaPredicted RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 MESP1Q9BRJ9 268 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 SRSF8Q9BRL6 282 aaKnown RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 CRACR2AQ9BSW2 395 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 TUBB2BQ9BVA1 445 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 TTYH3Q9C0H2 523 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 MRPL44Q9H9J2 332 aaKnown RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 RRP7BPQ9NSQ0 103 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 SPATS2LQ9NUQ6 558 aaKnown RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 JKAMPQ9P055 326 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 DNMT3BQ9UBC3 853 aaKnown RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 IL19Q9UHD0 177 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 AURKCQ9UQB9 309 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 DRG1Q9Y295 367 aaKnown RBP4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 ADAM18Q9Y3Q7 739 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 SESN1Q9Y6P5 492 aa4.15□□□□□ -1.75
RNU4-60P-201ENST00000517239 CLRN2A0PK11 232 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 C16orf96A6NNT2 1141 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 H0YC42 278 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM229AH3BQW9 127 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 M0QYT0 321 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 AP3B1O00203 1094 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 ADAMDEC1O15204 470 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZNF185O15231 689 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 TLR2O60603 784 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 RTN2O75298 545 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 PALMO75781 387 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 RECQL5O94762 991 aaPredicted RBP4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 ALDH1A2O94788 518 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 SASH1O94885 1247 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 PENKP01210 267 aaPredicted RBP4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 PRR35P0CG20 571 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 GHRP10912 638 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 PEPDP12955 493 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 ACP5P13686 325 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 GABRB1P18505 474 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 IL10P22301 178 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMOD1P28289 359 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 NTSR1P30989 418 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLC6A4P31645 630 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 ADMP35318 185 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 ANP32AP39687 249 aaKnown RBP4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 RABIFP47224 123 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 SULT1E1P49888 294 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 HNMTP50135 292 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZNF81P51508 661 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 CAPZA1P52907 286 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 PTTG1IPP53801 180 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 YBX1P67809 324 aaKnown RBP4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 TUBB4BP68371 445 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 ADAM17P78536 824 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 IL13RA1P78552 427 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 CEBPZQ03701 1054 aaKnown RBP4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 GOLGA8FQ08AF8 430 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 LMAN2Q12907 356 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 TRIM28Q13263 835 aaKnown RBP4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 FRG1Q14331 258 aaKnown RBP4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 INAQ16352 499 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 MEP1BQ16820 701 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 PTCHD3Q3KNS1 767 aa4.14□□□□□ -1.75
RNU4-60P-201ENST00000517239 MGAT5BQ3V5L5 792 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms