RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 UBE2J1Q9Y385 318 aaPredicted RBP3.24□□□□□ -1.89
RNU6-1088P-201ENST00000516850 PCDHB7Q9Y5E2 793 aa3.24□□□□□ -1.89
RNU6-1088P-201ENST00000516850 A0A0G2JK05 382 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 OR2W5A6NFC9 320 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ACOT8O14734 319 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 TNFRSF13BO14836 293 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ATG13O75143 517 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 HOXB2P14652 356 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 EGR1P18146 543 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 TGM2P21980 687 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ENTPD1P49961 510 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 NSUN2Q08J23 767 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 PGM5Q15124 567 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 SLC5A9Q2M3M2 681 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ARL13BQ3SXY8 428 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ARHGAP15Q53QZ3 475 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 NUGGCQ68CJ6 796 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 CAPRIN2Q6IMN6 1127 aaKnown RBP3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 WDR93Q6P2C0 686 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 FBXO38Q6PIJ6 1188 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 SLC39A5Q6ZMH5 540 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 PIK3AP1Q6ZUJ8 805 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 OIT3Q8WWZ8 545 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 MSI2Q96DH6 328 aaKnown RBP3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 MED30Q96HR3 178 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 COLEC11Q9BWP8 271 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 SFXN1Q9H9B4 322 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 PLK2Q9NYY3 685 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 WNT16Q9UBV4 365 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 PCDHA7Q9UN72 937 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 MAN2B2Q9Y2E5 1009 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 CEP83Q9Y592 693 aa3.23□□□□□ -1.89
RNU6-1088P-201ENST00000516850 PNMA6EA0A0J9YXQ4 647 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 A6NNC1 897 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 NPC1O15118 1278 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 IFNA2P01563 188 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 PECAM1P16284 738 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ARRB2P32121 409 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 MAPKAPK3Q16644 382 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ZNF324BQ6AW86 544 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 HMBOX1Q6NT76 420 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ZNF474Q6S9Z5 364 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 DLK2Q6UY11 383 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 DGKHQ86XP1 1220 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ANKRD13AQ8IZ07 590 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 MIB2Q96AX9 1013 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 TIFAQ96CG3 184 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 ISCUQ9H1K1 167 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 STARD7Q9NQZ5 370 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 HELLSQ9NRZ9 838 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 RGL1Q9NZL6 768 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 TNFSF13BQ9Y275 285 aa3.22□□□□□ -1.89
RNU6-1088P-201ENST00000516850 A0A1W2PPC4 97 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 GAGE12JA6NER3 117 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 J3KTA2 159 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 KIF3BO15066 747 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PPP6R2O75170 966 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CNTN5O94779 1100 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NDST3O95803 873 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 KLKB1P03952 638 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 HOXC6P09630 235 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 RFPL3SP0C7P2 107 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CPA1P15085 419 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TSHRP16473 764 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 GABRB3P28472 473 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TNFRSF8P28908 595 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CASP5P51878 434 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SLC37A1P57057 533 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 HYAL1Q12794 435 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 GALEQ14376 348 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 GALNT3Q14435 633 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NFATC4Q14934 902 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 WASHC2DQ5SRD0 308 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 C10orf76Q5T2E6 689 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CYB5RLQ6IPT4 315 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PARM1Q6UWI2 310 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 C16orf89Q6UX73 402 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SPATA2LQ8IUW3 424 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 RNF152Q8N8N0 203 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 OR52N4Q8NGI2 321 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NUDCD2Q8WVJ2 157 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NEUROG1Q92886 237 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ZNF347Q96SE7 839 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBCBQ99426 244 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 DDX21Q9NR30 783 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 GJB4Q9NTQ9 266 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TXLNGQ9NUQ3 528 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CA14Q9ULX7 337 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 MYO6Q9UM54 1294 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 FAM50BQ9Y247 325 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 LMTK3Q96Q04 1460 aa3.21□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NOTCH4Q99466 2003 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 C3orf70A6NLC5 250 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 FOXO6A8MYZ6 492 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 MDM4O15151 490 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ALDOAP04075 364 aaKnown RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CYP1A2P05177 515 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 LCKP06239 509 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms