RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MAFGO15525 162 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 CHGBP05060 677 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 PYGMP11217 842 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 ESRRAP11474 423 aaPredicted RBP3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 F8A1P23610 371 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 CDC25CP30307 473 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 ABHD18Q0P651 414 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 TRDNQ13061 729 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 BECN1Q14457 450 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 KRT32Q14532 448 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 STARD3Q14849 445 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 NECTIN1Q15223 517 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 LLGL1Q15334 1064 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 NR0B2Q15466 257 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 CDC37Q16543 378 aaPredicted RBP3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 SLFNL1Q499Z3 407 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 VPS53Q5VIR6 699 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 ABHD17CQ6PCB6 329 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 CATSPER4Q7RTX7 472 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 KDELC2Q7Z4H8 507 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF589Q86UQ0 364 aaPredicted RBP3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 IQCA1Q86XH1 822 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 IRF2BP1Q8IU81 584 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 LRRC75A-AS1Q8N1F1 130 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 FBXL16Q8N461 479 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 LIX1Q8N485 282 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 CNNM3Q8NE01 707 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 FDCSPQ8NFU4 85 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 KCNB2Q92953 911 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 PSMG2Q969U7 264 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 RNF25Q96BH1 459 aaPredicted RBP3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 TAAR9Q96RI9 348 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 MAP3K14Q99558 947 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 SLX1AQ9BQ83 275 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 TWSG1Q9GZX9 223 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 LSG1Q9H089 658 aaKnown RBP3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 SLKQ9H2G2 1235 aaPredicted RBP3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 IL21Q9HBE4 155 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 IL17RBQ9NRM6 502 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 C1GALT1Q9NS00 363 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 AGPAT5Q9NUQ2 364 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 VPS51Q9UID3 782 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 PILRAQ9UKJ1 303 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 PCDHB6Q9Y5E3 794 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 PCDHGA3Q9Y5H0 932 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 B3GALT1Q9Y5Z6 326 aa3.39□□□□□ -1.87
SCARNA13-201ENST00000516672 DENND4CQ5VZ89 1909 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 A0A087WZ62 844 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TMEM89A2RUT3 159 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 GOLGA6L3A6NEY3 463 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ARGFXA6NJG6 315 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TSPY2A6NKD2 308 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 G3V4G9 280 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 I3L4J1 428 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 BACH1O14867 736 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 MAGEB2O15479 319 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TGFB1I1O43294 461 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TCF21O43680 179 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 NMT2O60551 498 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CUTAO60888 179 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 GADD45BO75293 160 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 PIAS2O75928 621 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 VNN2O95498 520 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 PRB2P02812 416 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CYP21A2P08686 494 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 HOXD4P09016 255 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TMIGD3P0DMS9 266 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 PDHBP11177 359 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TOP1P11387 765 aaKnown RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CD19P15391 556 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 SRD5A1P18405 259 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ATP4AP20648 1035 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TMOD1P28289 359 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 HOXA11P31270 313 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 GNL1P36915 607 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ALDH1A3P47895 512 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 COPAP53621 1224 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 RCAN1P53805 252 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ANAPC15P60006 121 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ACTR2P61160 394 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ZXDBP98169 803 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 FAM160A1Q05DH4 1040 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 ZNF543Q08ER8 600 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TRAF1Q13077 416 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TUSC3Q13454 348 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 FZD2Q14332 565 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 DHCR24Q15392 516 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 SEZ6Q53EL9 994 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CATSPEREQ5SY80 951 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CASC10Q5T4H9 136 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 FAM102AQ5T9C2 384 aaPredicted RBP3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 PRAMEF17Q5VTA0 474 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 TRIM65Q6PJ69 517 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 PPP4R3CPQ6ZMV5 832 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 KRT77Q7Z794 578 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 NEK8Q86SG6 692 aa3.38□□□□□ -1.87
SCARNA13-201ENST00000516672 CUZD1Q86UP6 607 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms