RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SH3KBP1Q96B97 665 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CTHRC1Q96CG8 243 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 VPS50Q96JG6 964 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NR1H4Q96RI1 486 aaPredicted RBP3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PRR25Q96S07 402 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CD180Q99467 661 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ELOVL1Q9BW60 279 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 MUC13Q9H3R2 512 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TRIM36Q9NQ86 728 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 INTS13Q9NVM9 706 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PPP1R14DQ9NXH3 145 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 KCND2Q9NZV8 630 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PPP4R1LQ9P1A2 415 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CD207Q9UJ71 328 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CORO1CQ9ULV4 474 aaPredicted RBP3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NOX1Q9Y5S8 564 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SNX8Q9Y5X2 465 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 COPG1Q9Y678 874 aaKnown RBP3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 DUSP10Q9Y6W6 482 aa3.55□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ZNF536O15090 1300 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NPEPPSL1A6NEC2 478 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GAGE10A6NGK3 116 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 MARCH11A6NNE9 402 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 AP4M1O00189 453 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PER2O15055 1255 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TRIM24O15164 1050 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 LDLRAD4O15165 306 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SLC16A3O15427 465 aaKnown RBP3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NUAK1O60285 661 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 DKC1O60832 514 aaKnown RBP eCLIP3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 BEST1O76090 585 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 KAT7O95251 611 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CCNDBP1O95273 360 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PGM3O95394 542 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ALDOAP04075 364 aaKnown RBP3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CYP3A4P08684 503 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ARSAP15289 507 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ABCD1P33897 745 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 BSGP35613 385 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HNF1BP35680 557 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 UFM1P61960 85 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RAE1P78406 368 aaKnown RBP3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 E2F1Q01094 437 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GOLGA8FQ08AF8 430 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NEXNQ0ZGT2 675 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RESTQ13127 1097 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CYP1B1Q16678 543 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SLC9B1Q4ZJI4 515 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 SP5Q6BEB4 398 aaPredicted RBP3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TMPRSS6Q8IU80 811 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TMEM151BQ8IW70 566 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RPAP2Q8IXW5 612 aaPredicted RBP3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 VPS52Q8N1B4 723 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TTC30BQ8N4P2 665 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 WDTC1Q8N5D0 677 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NKAIN3Q8N8D7 197 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 MYCBPAPQ8TBZ2 947 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 NCSTNQ92542 709 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 FAM84AQ96KN4 292 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CLSTN3Q9BQT9 956 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HDHD5Q9BXW7 423 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RSPH9Q9H1X1 276 aaPredicted RBP3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CDCP1Q9H5V8 836 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GALNT9Q9HCQ5 603 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RXFP3Q9NSD7 469 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 HCFC1R1Q9NWW0 138 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 MTMR4Q9NYA4 1195 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 DKK3Q9UBP4 350 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 KLQ9UEF7 1012 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TMEM5Q9Y2B1 443 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 LYVE1Q9Y5Y7 322 aa3.54□□□□□ -1.84
SCARNA15.2-201ENST00000516409 XDHP47989 1333 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TEX13CA0A0J9YWL9 993 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GOLGA6L10A0A0M3HER8 536 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TEX22C9J3V5 150 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TMEM232C9JQI7 657 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CES2O00748 559 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ZNF213O14771 459 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PRAMEF2O60811 474 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ERAL1O75616 437 aaKnown RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TSPAN9O75954 239 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 METTL18O95568 372 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 APOA4P06727 396 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 IL6RP08887 468 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TMIGD3P0DMS9 266 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 RARGP13631 454 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 ZNF37AP17032 561 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 TAL1P17542 331 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 IL11P20809 199 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PRPH2P23942 346 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CNR2P34972 360 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PBX3P40426 434 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 GARSP41250 739 aaKnown RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 DPP6P42658 865 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CPA2P48052 419 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 CTCFP49711 727 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 MVDP53602 400 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PDE1AP54750 535 aa3.53□□□□□ -1.84
SCARNA15.2-201ENST00000516409 PSMC6P62333 389 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms