RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 KIF20AO95235 890 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 DLDP09622 509 aaKnown RBP10.95□□□□□ -0.66
CLDND1-231ENST00000515620 P4HA1P13674 534 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 RXRGP48443 463 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 ERVPABLB-1P60509 514 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 DAB2P98082 770 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 EHHADHQ08426 723 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 PDE4CQ08493 712 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 COLEC12Q5KU26 742 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 SPATS2Q86XZ4 545 aaKnown RBP10.95□□□□□ -0.66
CLDND1-231ENST00000515620 NELFCDQ8IXH7 590 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 FAM217AQ8IXS0 508 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 ZNF276Q8N554 614 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 PLEKHO2Q8TD55 490 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 CYFIP2Q96F07 1278 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 CLIC6Q96NY7 704 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 DEPDC7Q96QD5 511 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 OMDQ99983 421 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 NEUROG2Q9H2A3 272 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 ERVMER34-1Q9H9K5 563 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 POLR1BQ9H9Y6 1135 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 ASCL3Q9NQ33 180 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 THSD1Q9NS62 852 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 SUN2Q9UH99 717 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 FBXO2Q9UK22 296 aaPredicted RBP10.95□□□□□ -0.66
CLDND1-231ENST00000515620 SCML1Q9UN30 329 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 A0A087X0B3 334 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 EIF3DO15371 548 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLDND1-231ENST00000515620 STX6O43752 255 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 SIN3BO75182 1162 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 CSO75390 466 aaKnown RBP10.94□□□□□ -0.66
CLDND1-231ENST00000515620 VNN1O95497 513 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 NTRK1P04629 796 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 ATP5BP06576 529 aaKnown RBP10.94□□□□□ -0.66
CLDND1-231ENST00000515620 POLR2EP19388 210 aaKnown RBP10.94□□□□□ -0.66
CLDND1-231ENST00000515620 TRIM21P19474 475 aaKnown RBP10.94□□□□□ -0.66
CLDND1-231ENST00000515620 LSSP48449 732 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 CCR5P51681 352 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 SFSWAPQ12872 951 aaKnown RBP10.94□□□□□ -0.66
CLDND1-231ENST00000515620 CST6Q15828 149 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 CCDC73Q6ZRK6 1079 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 BRAPQ7Z569 592 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 UNC93AQ86WB7 457 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 MMAAQ8IVH4 418 aaKnown RBP10.94□□□□□ -0.66
CLDND1-231ENST00000515620 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLDND1-231ENST00000515620 WFDC5Q8TCV5 224 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 PLD4Q96BZ4 506 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 TWNKQ96RR1 684 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 PANK2Q9BZ23 570 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 FZD4Q9ULV1 537 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 CLIC4Q9Y696 253 aa10.94□□□□□ -0.66
CLDND1-231ENST00000515620 LRRIQ3A6PVS8 624 aaPredicted RBP10.93□□□□□ -0.66
CLDND1-231ENST00000515620 K7ENP7 123 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 TERTO14746 1132 aaKnown RBP10.93□□□□□ -0.66
CLDND1-231ENST00000515620 OPA1O60313 960 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 CD70P32970 193 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 ASPAP45381 313 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 PSMD8P48556 350 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 HARS2P49590 506 aaKnown RBP10.93□□□□□ -0.66
CLDND1-231ENST00000515620 SGSHP51688 502 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 ADPRHP54922 357 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 PPP2CBP62714 309 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 PPP2CAP67775 309 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 ZNF211Q13398 564 aaPredicted RBP10.93□□□□□ -0.66
CLDND1-231ENST00000515620 CDCP2Q5VXM1 449 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 SPOPLQ6IQ16 392 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 NAPEPLDQ6IQ20 393 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 INO80CQ6PI98 192 aaPredicted RBP10.93□□□□□ -0.66
CLDND1-231ENST00000515620 EPM2AIP1Q7L775 607 aaPredicted RBP10.93□□□□□ -0.66
CLDND1-231ENST00000515620 TMC6Q7Z403 805 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 KIAA0907Q7Z7F0 614 aaPredicted RBP10.93□□□□□ -0.66
CLDND1-231ENST00000515620 OR14C36Q8NHC7 312 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 MYO19Q96H55 970 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 USP3Q9Y6I4 520 aa10.93□□□□□ -0.66
CLDND1-231ENST00000515620 ARID1BQ8NFD5 2236 aaPredicted RBP10.92□□□□□ -0.66
CLDND1-231ENST00000515620 A0A1B0GVM2 712 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 C10orf142B7Z368 130 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 FFAR2O15552 330 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 EXOC3O60645 756 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 C4BPAP04003 597 aaKnown RBP10.92□□□□□ -0.66
CLDND1-231ENST00000515620 SLC8A1P32418 973 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 AP3M2P53677 418 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 ST8SIA6P61647 398 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 YWHAGP61981 247 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLDND1-231ENST00000515620 NFKB2Q00653 900 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 TRIP4Q15650 581 aaPredicted RBP10.92□□□□□ -0.66
CLDND1-231ENST00000515620 HNRNPA1L2Q32P51 320 aaKnown RBP10.92□□□□□ -0.66
CLDND1-231ENST00000515620 HS1BP3Q53T59 392 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 C3orf38Q5JPI3 329 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 FAM26FQ5R3K3 315 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 CCDC81Q6ZN84 652 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 SND1Q7KZF4 910 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLDND1-231ENST00000515620 ARHGAP18Q8N392 663 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 SLC25A45Q8N413 288 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 AADATQ8N5Z0 425 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 PDILTQ8N807 584 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 EXD3Q8N9H8 876 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 MFSD2AQ8NA29 543 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 OR4C6Q8NH72 309 aa10.92□□□□□ -0.66
CLDND1-231ENST00000515620 ZNF507Q8TCN5 953 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms