RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 R3HCC1Q9Y3T6 440 aaKnown RBP12.37□□□□□ -0.43
SMAD5-210ENST00000515005 A1L4Q6 167 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 GOLGA8IPA6NC78 632 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 GOLGA8JA6NMD2 632 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 LATO43561 262 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 TACC1O75410 805 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 BEST1O76090 585 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 AGFG2O95081 481 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 CYBBP04839 570 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 RNF224P0DH78 156 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 COL8A1P27658 744 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 TRAPPC10P48553 1259 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 ADPRHP54922 357 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 SFSWAPQ12872 951 aaKnown RBP12.36□□□□□ -0.43
SMAD5-210ENST00000515005 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
SMAD5-210ENST00000515005 C10orf120Q5SQS8 335 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 CRTC1Q6UUV9 634 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 ADIPOR2Q86V24 386 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 IQCHQ86VS3 1027 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 GPBP1Q86WP2 473 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 TICAM1Q8IUC6 712 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 SRRM1Q8IYB3 904 aaKnown RBP12.36□□□□□ -0.43
SMAD5-210ENST00000515005 ZMIZ2Q8NF64 920 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 OMDQ99983 421 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 ARHGAP20Q9P2F6 1191 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 SUN2Q9UH99 717 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 AGO1Q9UL18 857 aaKnown RBP12.36□□□□□ -0.43
SMAD5-210ENST00000515005 FZD4Q9ULV1 537 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 CA5BQ9Y2D0 317 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 ZNF510Q9Y2H8 683 aa12.36□□□□□ -0.43
SMAD5-210ENST00000515005 CCDC187A0A096LP49 1063 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 CPED1A4D0V7 1026 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 SIN3BO75182 1162 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 HMBSP08397 361 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 RARGP13631 454 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 CORO1AP31146 461 aaKnown RBP12.35□□□□□ -0.43
SMAD5-210ENST00000515005 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
SMAD5-210ENST00000515005 PDX1P52945 283 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 KCNA1Q09470 495 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 OVGP1Q12889 678 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 KCNAB2Q13303 367 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 CST6Q15828 149 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 CDKN3Q16667 212 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 MANEAQ5SRI9 462 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 KLHDC10Q6PID8 442 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 JAMLQ86YT9 394 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 MMAAQ8IVH4 418 aaKnown RBP12.35□□□□□ -0.43
SMAD5-210ENST00000515005 AADATQ8N5Z0 425 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 ZSCAN1Q8NBB4 408 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 OR14C36Q8NHC7 312 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 SMARCD1Q96GM5 515 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 SMOQ99835 787 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 FBXO44Q9H4M3 255 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 INTS13Q9NVM9 706 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMAD5-210ENST00000515005 NLGN3Q9NZ94 848 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 PCDHGA7Q9Y5G6 932 aa12.35□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3DA0A087WVF3 549 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3IA0A087WXS9 549 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3EA0A087X179 549 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3KA0A087X1G2 549 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 A0A1W2PQH9 124 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 VPS37CA5D8V6 355 aaPredicted RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3FA6NER0 549 aaPredicted RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 A8MXQ7 604 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3LB9A6J9 549 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 K7ESM1 405 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 MTSS1O43312 755 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 AP1G2O75843 785 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 PIAS2O75928 621 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 NEBLO76041 1014 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 DLDP09622 509 aaKnown RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3HP0C7X1 549 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 ALPPL2P10696 532 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 MAT2AP31153 395 aaKnown RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 SLC8A1P32418 973 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 ABCD1P33897 745 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 DCTP40126 519 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 CD97P48960 835 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 POLE2P56282 527 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 ZNF177Q13360 481 aaPredicted RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 STAT4Q14765 748 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 POM121L1PQ3SYA9 428 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 MBLAC2Q68D91 279 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3GQ6DHY5 549 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3CQ6IPX1 549 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 GUSBP11Q6P575 273 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 DYMQ7RTS9 669 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 GPRIN1Q7Z2K8 1008 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 EFL1Q7Z2Z2 1120 aaKnown RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 PRPF39Q86UA1 669 aaKnown RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 ATCAYQ86WG3 371 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 DENND1CQ8IV53 801 aa12.34□□□□□ -0.43
SMAD5-210ENST00000515005 TBC1D3Q8IZP1 549 aaPredicted RBP12.34□□□□□ -0.43
SMAD5-210ENST00000515005 WFIKKN2Q8TEU8 576 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms