RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 FNDC3BQ53EP0 1204 aaKnown RBP25.39■■□□□ 1.66
SNF8-213ENST00000514929 RAP1GAP2Q684P5 730 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 MBLAC2Q68D91 279 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 RNF43Q68DV7 783 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 KIAA0907Q7Z7F0 614 aaPredicted RBP25.39■■□□□ 1.66
SNF8-213ENST00000514929 ADIPOR2Q86V24 386 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 CHSY1Q86X52 802 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 CARNMT1Q8N4J0 409 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 ATP6V0D2Q8N8Y2 350 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 CYB5D2Q8WUJ1 264 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 RNF34Q969K3 372 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 PRDM16Q9HAZ2 1276 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 COX16Q9P0S2 106 aa25.39■■□□□ 1.66
SNF8-213ENST00000514929 XPO7Q9UIA9 1087 aaKnown RBP25.39■■□□□ 1.66
SNF8-213ENST00000514929 DNAH14Q0VDD8 3507 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 DCDC2BA2VCK2 349 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 ATP5BP06576 529 aaKnown RBP25.38■■□□□ 1.65
SNF8-213ENST00000514929 SLC2A3P11169 496 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 POLR2EP19388 210 aaKnown RBP25.38■■□□□ 1.65
SNF8-213ENST00000514929 CDH18Q13634 790 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 LYSMD4Q5XG99 296 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 SLC26A9Q7LBE3 791 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 ZDHHC17Q8IUH5 632 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 LGI2Q8N0V4 545 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 CFAP52Q8N1V2 620 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 FIBINQ8TAL6 211 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 MYEOVQ96EZ4 313 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 MKRN2Q9H000 416 aaKnown RBP25.38■■□□□ 1.65
SNF8-213ENST00000514929 GANQ9H2C0 597 aa25.38■■□□□ 1.65
SNF8-213ENST00000514929 FAM207AQ9NSI2 230 aaPredicted RBP25.38■■□□□ 1.65
SNF8-213ENST00000514929 NUP205Q92621 2012 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 KHNYNO15037 678 aaKnown RBP25.37■■□□□ 1.65
SNF8-213ENST00000514929 DAB1O75553 588 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 ABCB4P21439 1286 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 TACR2P21452 398 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 CCR1P32246 355 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 CDH5P33151 784 aaPredicted RBP25.37■■□□□ 1.65
SNF8-213ENST00000514929 KLK7P49862 253 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 COPB1P53618 953 aaKnown RBP25.37■■□□□ 1.65
SNF8-213ENST00000514929 LIMK1P53667 647 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 EIF4EBP2Q13542 120 aaPredicted RBP25.37■■□□□ 1.65
SNF8-213ENST00000514929 IL31Q6EBC2 164 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 NOP9Q86U38 636 aaKnown RBP25.37■■□□□ 1.65
SNF8-213ENST00000514929 DEFB119Q8N690 84 aa25.37■■□□□ 1.65
SNF8-213ENST00000514929 KCNU1A8MYU2 1149 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 DLDP09622 509 aaKnown RBP25.36■■□□□ 1.65
SNF8-213ENST00000514929 HLA-EP13747 358 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 CDK11BP21127 795 aaKnown RBP25.36■■□□□ 1.65
SNF8-213ENST00000514929 NOS2P35228 1153 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 POLR2FP61218 127 aaKnown RBP25.36■■□□□ 1.65
SNF8-213ENST00000514929 NME3Q13232 169 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 ERICH1Q86X53 443 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 TMPRSS6Q8IU80 811 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 SYT12Q8IV01 421 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 DDX1Q92499 740 aaKnown RBP25.36■■□□□ 1.65
SNF8-213ENST00000514929 PRCCQ92733 491 aaPredicted RBP25.36■■□□□ 1.65
SNF8-213ENST00000514929 C18orf8Q96DM3 657 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 SIPA1Q96FS4 1042 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 PCMTD1Q96MG8 357 aaPredicted RBP25.36■■□□□ 1.65
SNF8-213ENST00000514929 EDEM2Q9BV94 578 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 CD93Q9NPY3 652 aa25.36■■□□□ 1.65
SNF8-213ENST00000514929 FAM170AA1A519 330 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 PATE3B3GLJ2 98 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 F5H5T6 163 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 NDUFS2O75306 463 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 GFPT2O94808 682 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 LUC7L3O95232 432 aaKnown RBP25.35■■□□□ 1.65
SNF8-213ENST00000514929 LSM8O95777 96 aaKnown RBP25.35■■□□□ 1.65
SNF8-213ENST00000514929 DPP6P42658 865 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 RNASE9P60153 205 aaKnown RBP25.35■■□□□ 1.65
SNF8-213ENST00000514929 LMAN2Q12907 356 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 STPG1Q5TH74 334 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 METTL3Q86U44 580 aaKnown RBP25.35■■□□□ 1.65
SNF8-213ENST00000514929 MSANTD4Q8NCY6 345 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 ZNF397Q8NF99 534 aaPredicted RBP25.35■■□□□ 1.65
SNF8-213ENST00000514929 EPS8L1Q8TE68 723 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 TMEM245Q9H330 911 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 NLRC4Q9NPP4 1024 aa25.35■■□□□ 1.65
SNF8-213ENST00000514929 LIMA1Q9UHB6 759 aaKnown RBP25.35■■□□□ 1.65
SNF8-213ENST00000514929 ATXN2Q99700 1313 aaKnown RBP25.35■■□□□ 1.65
SNF8-213ENST00000514929 H0Y626 953 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 M0QYT0 321 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 MMEP08473 750 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 ACADMP11310 421 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 MATKP42679 507 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 COPAP53621 1224 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 TYRO3Q06418 890 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 SYCP1Q15431 976 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 PTPRNQ16849 979 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 CACUL1Q86Y37 369 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 ZNF366Q8N895 744 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 SPAG5Q96R06 1193 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 TMEM63CQ9P1W3 806 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 DAAM1Q9Y4D1 1078 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 CACNA1AO00555 2505 aa25.34■■□□□ 1.65
SNF8-213ENST00000514929 LNP1A1A4G5 178 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 LGALS16A8MUM7 142 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 ITPKAP23677 461 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 GABRB2P47870 512 aa25.33■■□□□ 1.65
SNF8-213ENST00000514929 ST8SIA6P61647 398 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms