RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 TMEM161BQ8NDZ6 487 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 ZNF560Q96MR9 790 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 KCNK16Q96T55 309 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 RUSC1Q9BVN2 902 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 SLC12A9Q9BXP2 914 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 CCSER1Q9C0I3 900 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TMEM60Q9H2L4 133 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TMEM245Q9H330 911 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 EHD2Q9NZN4 543 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MARK1Q9P0L2 795 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TUBD1Q9UJT1 453 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 LSM7Q9UK45 103 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 AGAP1Q9UPQ3 857 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 KIAA1024Q9UPX6 916 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 SLC27A6Q9Y2P4 619 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PCDHGA7Q9Y5G6 932 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 VPS13CQ709C8 3753 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 SHANK1Q9Y566 2161 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 TISP43B9A030 160 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 E9PMD0 336 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 CCER2I3L3R5 266 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 HNRNPRO43390 633 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 PIAS2O75928 621 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 PAX3P23760 479 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 MCM7P33993 719 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 CCT6AP40227 531 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 NUMBP49757 651 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 MAPK7Q13164 816 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 STK3Q13188 491 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 SOWAHAQ2M3V2 549 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 DEFB133Q30KQ1 61 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 MDH1BQ5I0G3 518 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 FYB2Q5VWT5 728 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 ZNF776Q68DI1 518 aaPredicted RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 GALNT17Q6IS24 598 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 FAM171BQ6P995 826 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 GALNT11Q8NCW6 608 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 OR2T34Q8NGX1 318 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 GRAMD1AQ96CP6 724 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 NAP1L4Q99733 375 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 DDX19AQ9NUU7 478 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 DNAJC28Q9NX36 388 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 DAXXQ9UER7 740 aaPredicted RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 CPSF3Q9UKF6 684 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 FN1P02751 2386 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 MYH11P35749 1972 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 CSPG4Q6UVK1 2322 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 NEMP2A6NFY4 417 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 TCP11X1B4DZS4 312 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 NKX2-8O15522 239 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 TCEA3O75764 348 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 LUC7L3O95232 432 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 DDAH2O95865 285 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 LDLRP01130 860 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 IGHDP01880 384 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 HMBSP08397 361 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 MAPTP10636 758 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 MLLT3P42568 568 aaPredicted RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 LHX1P48742 406 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 VASPP50552 380 aaPredicted RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 SMTNP53814 917 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 ADPRHP54922 357 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 ZBTB16Q05516 673 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 GOLGA8FQ08AF8 430 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 GOLGA8DPQ0D2H9 430 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 KCNMA1Q12791 1236 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 EIF4HQ15056 248 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 NAPEPLDQ6IQ20 393 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 TIPARPQ7Z3E1 657 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 CCDC83Q8IWF9 413 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 NUP93Q8N1F7 819 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 ERMNQ8TAM6 284 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 DDI1Q8WTU0 396 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 KLK6Q92876 244 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 KLHDC7BQ96G42 594 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 PIWIL1Q96J94 861 aaKnown RBP3.41□□□□□ -1.86
CHD1-211ENST00000514344 CCDC3Q9BQI4 270 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 ZNF518BQ9C0D4 1074 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 FZD3Q9NPG1 666 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 RRN3Q9NYV6 651 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 NLGN3Q9NZ94 848 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 FBXO10Q9UK96 956 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 C2CD2Q9Y426 696 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 COL6A5A8TX70 2615 aa3.41□□□□□ -1.86
CHD1-211ENST00000514344 SCAMP1O15126 338 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 NVLO15381 856 aaKnown RBP3.4□□□□□ -1.86
CHD1-211ENST00000514344 SLC31A1O15431 190 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 PRLRP16471 622 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 PDIA3P30101 505 aaKnown RBP3.4□□□□□ -1.86
CHD1-211ENST00000514344 HLA-FP30511 346 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 ETV5P41161 510 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 SLC5A3P53794 718 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 SRSF11Q05519 484 aaKnown RBP3.4□□□□□ -1.86
CHD1-211ENST00000514344 TCEA2Q15560 299 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 ZRSR1Q15695 479 aaKnown RBP3.4□□□□□ -1.86
CHD1-211ENST00000514344 CST6Q15828 149 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 ADALQ6DHV7 355 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 ZCCHC8Q6NZY4 707 aaKnown RBP3.4□□□□□ -1.86
CHD1-211ENST00000514344 TREML4Q6UXN2 200 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms