RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 ID2Q02363 134 aa5.29□□□□□ -1.56
SSBP2-217ENST00000513785 DEUP1Q05D60 604 aa5.29□□□□□ -1.56
SSBP2-217ENST00000513785 SRSF1Q07955 248 aaKnown RBP eCLIP5.29□□□□□ -1.56
SSBP2-217ENST00000513785 SLC14A1Q13336 389 aa5.29□□□□□ -1.56
SSBP2-217ENST00000513785 EIF4A2Q14240 407 aaKnown RBP5.29□□□□□ -1.56
SSBP2-217ENST00000513785 GBX1Q14549 363 aa5.29□□□□□ -1.56
SSBP2-217ENST00000513785 DEF8Q6ZN54 512 aa5.29□□□□□ -1.56
SSBP2-217ENST00000513785 EDC3Q96F86 508 aaKnown RBP5.29□□□□□ -1.56
SSBP2-217ENST00000513785 KAZALD1Q96I82 304 aa5.29□□□□□ -1.56
SSBP2-217ENST00000513785 DDX20Q9UHI6 824 aaKnown RBP5.29□□□□□ -1.56
SSBP2-217ENST00000513785 COL16A1Q07092 1604 aaPredicted RBP5.29□□□□□ -1.56
SSBP2-217ENST00000513785 COL18A1P39060 1754 aa5.29□□□□□ -1.56
SSBP2-217ENST00000513785 CPDO75976 1380 aa5.29□□□□□ -1.56
SSBP2-217ENST00000513785 A6NNZ2 444 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 TXNP10599 105 aaKnown RBP5.28□□□□□ -1.56
SSBP2-217ENST00000513785 PSG1P11464 419 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 CARSP49589 748 aaKnown RBP5.28□□□□□ -1.56
SSBP2-217ENST00000513785 GATMP50440 423 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 NANOS2P60321 138 aaKnown RBP5.28□□□□□ -1.56
SSBP2-217ENST00000513785 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
SSBP2-217ENST00000513785 CFHR3Q02985 330 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 MIDNQ504T8 468 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 HSP90AB2PQ58FF8 381 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 MEPCEQ7L2J0 689 aaKnown RBP5.28□□□□□ -1.56
SSBP2-217ENST00000513785 CHST15Q7LFX5 561 aaPredicted RBP5.28□□□□□ -1.56
SSBP2-217ENST00000513785 C16orf71Q8IYS4 520 aaPredicted RBP5.28□□□□□ -1.56
SSBP2-217ENST00000513785 SDR16C5Q8N3Y7 309 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 C11orf44Q8N8P7 122 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 VPS50Q96JG6 964 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 CAMK1GQ96NX5 476 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 POT1Q9NUX5 634 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 NKX1-2Q9UD57 310 aaPredicted RBP5.28□□□□□ -1.56
SSBP2-217ENST00000513785 ZNF212Q9UDV6 495 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 MID2Q9UJV3 735 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 MAFFQ9ULX9 164 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 SNX13Q9Y5W8 968 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 RGPD1P0DJD0 1748 aa5.28□□□□□ -1.56
SSBP2-217ENST00000513785 ZBED9Q6R2W3 1325 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 CNTNAP2Q9UHC6 1331 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 COL14A1Q05707 1796 aaKnown RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 H3BNX3 289 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 FOXN3O00409 490 aaPredicted RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 APAF1O14727 1248 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 CNOT3O75175 753 aaKnown RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 PARP1P09874 1014 aaKnown RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 ME1P48163 572 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 GRM3Q14832 879 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 MFSD13AQ14CX5 517 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 ST3GAL2Q16842 350 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 ZNF750Q32MQ0 723 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 ANKRD13BQ86YJ7 626 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 TTC17Q96AE7 1141 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 LTV1Q96GA3 475 aaPredicted RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 MARK4Q96L34 752 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 NUP62CLQ9H1M0 184 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 METTL14Q9HCE5 456 aaKnown RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 PNPLA8Q9NP80 782 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 OBP2AQ9NY56 170 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 COL20A1Q9P218 1284 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 STEAP1Q9UHE8 339 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 SQORQ9Y6N5 450 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 VIRMAQ69YN4 1812 aaKnown RBP5.27□□□□□ -1.57
SSBP2-217ENST00000513785 KIAA0232Q92628 1395 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 JCADQ9P266 1359 aa5.27□□□□□ -1.57
SSBP2-217ENST00000513785 NWD2Q9ULI1 1742 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 CRYABP02511 175 aaKnown RBP5.26□□□□□ -1.57
SSBP2-217ENST00000513785 HMOX1P09601 288 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 NTSR1P30989 418 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 PRKAR2BP31323 418 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 THBS3P49746 956 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 LMOD3Q0VAK6 560 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 SULT6B1Q6IMI4 303 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 ANO7Q6IWH7 933 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 VSTM1Q6UX27 236 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 C9orf47Q6ZRZ4 202 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 CCDC146Q8IYE0 955 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 TCP11L2Q8N4U5 519 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 C12orf76Q8N812 135 aaPredicted RBP5.26□□□□□ -1.57
SSBP2-217ENST00000513785 WIPF2Q8TF74 440 aaPredicted RBP5.26□□□□□ -1.57
SSBP2-217ENST00000513785 TSR2Q969E8 191 aaKnown RBP5.26□□□□□ -1.57
SSBP2-217ENST00000513785 MSLNLQ96KJ4 702 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 BTBD1Q9H0C5 482 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 CHST8Q9H2A9 424 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 DNAJB11Q9UBS4 358 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 RIMKLBQ9ULI2 386 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 HS3ST3B1Q9Y662 390 aa5.26□□□□□ -1.57
SSBP2-217ENST00000513785 IGSF1Q8N6C5 1336 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 LMO7Q8WWI1 1683 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.25□□□□□ -1.57
SSBP2-217ENST00000513785 OAZ2O95190 189 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 RHCEP18577 417 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 HTR6P50406 440 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 RPS13P62277 151 aaKnown RBP5.25□□□□□ -1.57
SSBP2-217ENST00000513785 RHDQ02161 417 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 KIAA1161Q6NSJ0 714 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 UNC13DQ70J99 1090 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 RNF44Q7L0R7 432 aa5.25□□□□□ -1.57
SSBP2-217ENST00000513785 SESTD1Q86VW0 696 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms